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AKT/AMPK-mediated phosphorylation of TBC1D4 disrupts the in..:
Eickelschulte, Samaneh ; Hartwig, Sonja ; Leiser, Ben...
Journal of Biological Chemistry. 296 (2021) - p. 100637 , 2021
Journal of Biological Chemistry. 296 (2021) - p. 100637 , 2021
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Optimizing network propagation for multi-omics data integra..:
Charmpi, Konstantina ; Chokkalingam, Manopriya ; Johnen, Ronja..
PLOS Computational Biology. 17 (2021) 11 - p. e1009161 , 2021
PLOS Computational Biology. 17 (2021) 11 - p. e1009161 , 2021
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4
Bias induced through network propagation:
Konstantina Charmpi (9901053) ; Manopriya Chokkalingam (11682093) ; Ronja Johnen (11682096).
https://figshare.com/articles/journal_contribution/Bias_induced_through_network_propagation_/16991712. , 2021
https://figshare.com/articles/journal_contribution/Bias_induced_through_network_propagation_/16991712. , 2021
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5
List of ageing-associated genes (STRING identifier and corr..:
Konstantina Charmpi (9901053) ; Manopriya Chokkalingam (11682093) ; Ronja Johnen (11682096).
https://figshare.com/articles/dataset/List_of_ageing-associated_genes_STRING_identifier_and_corresponding_gene_symbol_within_imputed_genes_based_on_the_JenAge_Ageing_Factor_Database_for_each_tissue_brain_and_liver_and_each_layer_mRNA_and_protein_in_Ori_i_et_al_i_13_dataset_/16991724. , 2021
https://figshare.com/articles/dataset/List_of_ageing-associated_genes_STRING_identifier_and_corresponding_gene_symbol_within_imputed_genes_based_on_the_JenAge_Ageing_Factor_Database_for_each_tissue_brain_and_liver_and_each_layer_mRNA_and_protein_in_Ori_i_et_al_i_13_dataset_/16991724. , 2021
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6
Inter-replicate consistency and within-patient similarity a..:
Konstantina Charmpi (9901053) ; Manopriya Chokkalingam (11682093) ; Ronja Johnen (11682096).
https://figshare.com/articles/figure/Inter-replicate_consistency_and_within-patient_similarity_across_network_smoothing_/16991736. , 2021
https://figshare.com/articles/figure/Inter-replicate_consistency_and_within-patient_similarity_across_network_smoothing_/16991736. , 2021
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7
MSEs and bias-variance tradeoff per grade group:
Konstantina Charmpi (9901053) ; Manopriya Chokkalingam (11682093) ; Ronja Johnen (11682096).
https://figshare.com/articles/journal_contribution/MSEs_and_bias-variance_tradeoff_per_grade_group_/16991715. , 2021
https://figshare.com/articles/journal_contribution/MSEs_and_bias-variance_tradeoff_per_grade_group_/16991715. , 2021
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8
Optimizing network propagation for multi-omics data integra..:
Konstantina Charmpi ; Manopriya Chokkalingam ; Ronja Johnen.
https://doi.org/10.1371/journal.pcbi.1009161. , 2021
https://doi.org/10.1371/journal.pcbi.1009161. , 2021
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9
AKT/AMPK-mediated phosphorylation of TBC1D4 disrupts the in..:
Eickelschulte, Samaneh ; Hartwig, Sonja ; Leiser, Ben...
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC8131924/. , 2021
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC8131924/. , 2021
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10
High similarity between smoothed scores of RWR and HD:
Konstantina Charmpi (9901053) ; Manopriya Chokkalingam (11682093) ; Ronja Johnen (11682096).
https://figshare.com/articles/journal_contribution/High_similarity_between_smoothed_scores_of_RWR_and_HD_/16991703. , 2021
https://figshare.com/articles/journal_contribution/High_similarity_between_smoothed_scores_of_RWR_and_HD_/16991703. , 2021
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11
Network propagation improves the correlation between mRNA a..:
Konstantina Charmpi (9901053) ; Manopriya Chokkalingam (11682093) ; Ronja Johnen (11682096).
https://figshare.com/articles/figure/Network_propagation_improves_the_correlation_between_mRNA_and_protein_levels_of_ageing_tissues_brain_and_liver_and_PCa_samples_/16991739. , 2021
https://figshare.com/articles/figure/Network_propagation_improves_the_correlation_between_mRNA_and_protein_levels_of_ageing_tissues_brain_and_liver_and_PCa_samples_/16991739. , 2021
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12
Normalized Laplacian induces a topology bias:
Konstantina Charmpi (9901053) ; Manopriya Chokkalingam (11682093) ; Ronja Johnen (11682096).
https://figshare.com/articles/figure/Normalized_Laplacian_induces_a_topology_bias_/16991727. , 2021
https://figshare.com/articles/figure/Normalized_Laplacian_induces_a_topology_bias_/16991727. , 2021
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13
Effect of network smoothing on gene-gene correlation and wi..:
Konstantina Charmpi (9901053) ; Manopriya Chokkalingam (11682093) ; Ronja Johnen (11682096).
https://figshare.com/articles/journal_contribution/Effect_of_network_smoothing_on_gene-gene_correlation_and_within-sample_variability_/16991709. , 2021
https://figshare.com/articles/journal_contribution/Effect_of_network_smoothing_on_gene-gene_correlation_and_within-sample_variability_/16991709. , 2021
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14
Between-dataset consistency during propagation process in d..:
Konstantina Charmpi (9901053) ; Manopriya Chokkalingam (11682093) ; Ronja Johnen (11682096).
https://figshare.com/articles/journal_contribution/Between-dataset_consistency_during_propagation_process_in_dependency_of_varying_spreading_parameters_/16991706. , 2021
https://figshare.com/articles/journal_contribution/Between-dataset_consistency_during_propagation_process_in_dependency_of_varying_spreading_parameters_/16991706. , 2021
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15
Different graph normalization approaches and their impact o..:
Konstantina Charmpi (9901053) ; Manopriya Chokkalingam (11682093) ; Ronja Johnen (11682096).
https://figshare.com/articles/dataset/Different_graph_normalization_approaches_and_their_impact_on_propagated_scores_/16991745. , 2021
https://figshare.com/articles/dataset/Different_graph_normalization_approaches_and_their_impact_on_propagated_scores_/16991745. , 2021