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Evidence for viral adaptation prior to initial sampling dur..:
Eric Alves (8108159) ; Marwah Al-Kaabi (14271716) ; Niamh M. Keane (14271719)...
https://figshare.com/articles/figure/Evidence_for_viral_adaptation_prior_to_initial_sampling_during_acute_early_infection_/21742820. , 2022
https://figshare.com/articles/figure/Evidence_for_viral_adaptation_prior_to_initial_sampling_during_acute_early_infection_/21742820. , 2022
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3
Consensus & non-consensus amino acid frequency changes in P..:
Eric Alves (8108159) ; Marwah Al-Kaabi (14271716) ; Niamh M. Keane (14271719)...
https://figshare.com/articles/dataset/Consensus_non-consensus_amino_acid_frequency_changes_in_Pol_between_1995_2021_in_Western_Australia_using_proviral_cohort_data_published_by_Moore_et_al_2002_/21742802. , 2022
https://figshare.com/articles/dataset/Consensus_non-consensus_amino_acid_frequency_changes_in_Pol_between_1995_2021_in_Western_Australia_using_proviral_cohort_data_published_by_Moore_et_al_2002_/21742802. , 2022
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4
Clinical and immunogenetic characteristics of the acute WA ..:
Eric Alves (8108159) ; Marwah Al-Kaabi (14271716) ; Niamh M. Keane (14271719)...
https://figshare.com/articles/dataset/Clinical_and_immunogenetic_characteristics_of_the_acute_WA_cohort_/21742850. , 2022
https://figshare.com/articles/dataset/Clinical_and_immunogenetic_characteristics_of_the_acute_WA_cohort_/21742850. , 2022
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5
Reverting HLA-nonmatched adaptations:
Eric Alves (8108159) ; Marwah Al-Kaabi (14271716) ; Niamh M. Keane (14271719)...
https://figshare.com/articles/dataset/Reverting_HLA-nonmatched_adaptations_/21742784. , 2022
https://figshare.com/articles/dataset/Reverting_HLA-nonmatched_adaptations_/21742784. , 2022
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6
HLA-level viral adaptation changes over time:
Eric Alves (8108159) ; Marwah Al-Kaabi (14271716) ; Niamh M. Keane (14271719)...
https://figshare.com/articles/figure/HLA-level_viral_adaptation_changes_over_time_/21742826. , 2022
https://figshare.com/articles/figure/HLA-level_viral_adaptation_changes_over_time_/21742826. , 2022
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7
De novo (< 10% initial, ≥ 90% final) and other (< 10% initi..:
Eric Alves (8108159) ; Marwah Al-Kaabi (14271716) ; Niamh M. Keane (14271719)...
https://figshare.com/articles/dataset/De_novo_10_initial_90_final_and_other_10_initial_10_x_90_final_HLA-matched_adaptations_/21742790. , 2022
https://figshare.com/articles/dataset/De_novo_10_initial_90_final_and_other_10_initial_10_x_90_final_HLA-matched_adaptations_/21742790. , 2022
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8
Viral adaptation dynamics over time by protein:
Eric Alves (8108159) ; Marwah Al-Kaabi (14271716) ; Niamh M. Keane (14271719)...
https://figshare.com/articles/figure/Viral_adaptation_dynamics_over_time_by_protein_/21742814. , 2022
https://figshare.com/articles/figure/Viral_adaptation_dynamics_over_time_by_protein_/21742814. , 2022
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9
Emergence of viral adaptation within the HLA-B*07-associate..:
Eric Alves (8108159) ; Marwah Al-Kaabi (14271716) ; Niamh M. Keane (14271719)...
https://figshare.com/articles/figure/Emergence_of_viral_adaptation_within_the_HLA-B_07-associated_GL9_epitope_in_subject_WA9_/21742805. , 2022
https://figshare.com/articles/figure/Emergence_of_viral_adaptation_within_the_HLA-B_07-associated_GL9_epitope_in_subject_WA9_/21742805. , 2022
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10
Clinical and immunogenetic characteristics of TN cohort:
Eric Alves (8108159) ; Marwah Al-Kaabi (14271716) ; Niamh M. Keane (14271719)...
https://figshare.com/articles/dataset/Clinical_and_immunogenetic_characteristics_of_TN_cohort_/21742853. , 2022
https://figshare.com/articles/dataset/Clinical_and_immunogenetic_characteristics_of_TN_cohort_/21742853. , 2022
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11
No correlation between change in HLA-matched adaptation lev..:
Eric Alves (8108159) ; Marwah Al-Kaabi (14271716) ; Niamh M. Keane (14271719)...
https://figshare.com/articles/figure/No_correlation_between_change_in_HLA-matched_adaptation_level_and_viral_load_or_CD4_sup_sup_T_cell_count_/21742829. , 2022
https://figshare.com/articles/figure/No_correlation_between_change_in_HLA-matched_adaptation_level_and_viral_load_or_CD4_sup_sup_T_cell_count_/21742829. , 2022
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12
IFNγ responses to HLA-associated HIV-specific CTL epitopes ..:
Eric Alves (8108159) ; Marwah Al-Kaabi (14271716) ; Niamh M. Keane (14271719)...
https://figshare.com/articles/figure/IFN_responses_to_HLA-associated_HIV-specific_CTL_epitopes_are_detected_in_HIV-1_infected_subjects_prior_to_full_seroconversion_/21742835. , 2022
https://figshare.com/articles/figure/IFN_responses_to_HLA-associated_HIV-specific_CTL_epitopes_are_detected_in_HIV-1_infected_subjects_prior_to_full_seroconversion_/21742835. , 2022
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13
Accumulation of HLA–C-associated HLA-matched adaptations is..:
Eric Alves (8108159) ; Marwah Al-Kaabi (14271716) ; Niamh M. Keane (14271719)...
https://figshare.com/articles/figure/Accumulation_of_HLA_C-associated_HLA-matched_adaptations_is_suggestive_of_strong_HLA_C-associated_CTL_immune_pressure_/21742844. , 2022
https://figshare.com/articles/figure/Accumulation_of_HLA_C-associated_HLA-matched_adaptations_is_suggestive_of_strong_HLA_C-associated_CTL_immune_pressure_/21742844. , 2022
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14
Amino acid frequency changes in Pol between 1992–2021 in We..:
Eric Alves (8108159) ; Marwah Al-Kaabi (14271716) ; Niamh M. Keane (14271719)...
https://figshare.com/articles/dataset/Amino_acid_frequency_changes_in_Pol_between_1992_2021_in_Western_Australia_/21742793. , 2022
https://figshare.com/articles/dataset/Amino_acid_frequency_changes_in_Pol_between_1992_2021_in_Western_Australia_/21742793. , 2022
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15
Consensus & non-consensus amino acid frequency changes in P..:
Eric Alves (8108159) ; Marwah Al-Kaabi (14271716) ; Niamh M. Keane (14271719)...
https://figshare.com/articles/dataset/Consensus_non-consensus_amino_acid_frequency_changes_in_Pol_between_1992_2021_in_Western_Australia_/21742796. , 2022
https://figshare.com/articles/dataset/Consensus_non-consensus_amino_acid_frequency_changes_in_Pol_between_1992_2021_in_Western_Australia_/21742796. , 2022