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Karollus, Alexander
49  Ergebnisse:
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1

Species-aware DNA language models capture regulatory elemen..:

Karollus, Alexander ; Hingerl, Johannes ; Gankin, Dennis...
Genome Biology.  25 (2024)  1 - p. , 2024
Link: https://doi.org/10.1186/..
 
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2

Viral genome sequencing to decipher in-hospital SARS-CoV-2 ..:

Esser, Elisabeth ; Schulte, Eva C. ; Graf, Alexander...
Scientific Reports.  14 (2024)  1 - p. , 2024
Link: https://doi.org/10.1038/..
 
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3

The adapted Activity-By-Contact model for enhancer–gene ass..:

Hecker, Dennis ; Behjati Ardakani, Fatemeh ; Karollus, Alexander...
Bioinformatics.  39 (2023)  2 - p. , 2023
Link: https://doi.org/10.1093/..
 
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4

Current sequence-based models capture gene expression deter..:

Karollus, Alexander ; Mauermeier, Thomas ; Gagneur, Julien
Genome Biology.  24 (2023)  1 - p. , 2023
Link: https://doi.org/10.1186/..
 
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5

Predicting mean ribosome load for 5'UTR of any length using..:

Karollus, Alexander ; Avsec, Žiga ; Gagneur, Julien.
PLOS Computational Biology.  17 (2021)  5 - p. e1008982 , 2021
Link: https://doi.org/10.1371/..
 
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6

Current sequence-based models capture gene expression deter..:

Karollus, Alexander ; Mauermeier, Thomas ; Gagneur, Julien
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC10045630/.  , 2023
Link: http://www.ncbi.nlm.nih...
 
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7

Current sequence-based models capture gene expression deter..:

Karollus, Alexander ; Mauermeier, Thomas ; Gagneur, Julien
doi:10.5281/zenodo.7076227.  , 2022
Link: https://zenodo.org/recor..
 
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8

The adapted Activity-By-Contact model for enhancer-gene ass..:

Hecker, Dennis ; Behjati Ardakani, Fatemeh ; Karollus, Alexander..
doi:10.1101/2022.01.28.478202.  , 2022
Link: https://zenodo.org/recor..
 
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9

Predicting mean ribosome load for 5'UTR of any length using..:

Karollus, Alexander ; Avsec, Žiga ; Gagneur, Julien
https://mediatum.ub.tum.de/1730575.  , 2021
Link: https://mediatum.ub.tum...
 
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10

Framepool supplementary data and tables:

Karollus, Alexander
doi:10.5281/zenodo.3584237.  , 2019
Link: https://zenodo.org/recor..
 
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11

Framepool supplementary data and tables:

Karollus, Alexander
doi:10.5281/zenodo.3584237.  , 2019
Link: https://zenodo.org/recor..
 
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12

Species-aware DNA language modeling - data:

Dennis Gankin ; Alexander Karollus ; Martin Grosshauser...
doi:10.5281/zenodo.7568343.  , 2023
Link: https://zenodo.org/recor..
 
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13

Code for the paper "Current sequence-based models capture g..:

Alexander Karollus ; Thomas Mauermeier ; Julien Gagneur
doi:10.5281/zenodo.7613254.  , 2023
Link: https://zenodo.org/recor..
 
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14

Supporting Data for Species-Aware DNA Language Models:

Alexander Karollus ; Johannes Hingerl ; Dennis Gankin.
doi:10.5281/zenodo.8247133.  , 2023
Link: https://zenodo.org/recor..
 
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15

Current sequence-based models capture gene expression deter..:

Alexander Karollus ; Thomas Mauermeier ; Julien Gagneur
https://doi.org/10.1186/s13059-023-02899-9.  , 2023
Link: https://doi.org/10.1186/..
 
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