E-LIB Suche - Ergebnisse für: Mark Chaisson

1

Scalable Nanopore sequencing of human genomes provides a co..:

Kolmogorov, Mikhail ; Billingsley, Kimberley J. ; Mastoras, Mira...
Nature Methods. 20 (2023) 10 - p. 1483-1492 , 2023

Link: https://doi.org/10.1038/..

2

Towards complete and error-free genome assemblies of all ve..:

Rhie, Arang ; McCarthy, Shane A. ; Fedrigo, Olivier...
Nature. 592 (2021) 7856 - p. 737-746 , 2021

Link: https://doi.org/10.1038/..

3

Deleterious mitochondrial DNA point mutations are overrepre..:

Samstag, Colby L. ; Hoekstra, Jake G. ; Huang, Chiu-Hui...
PLOS Genetics. 14 (2018) 11 - p. e1007805 , 2018

Link: https://doi.org/10.1371/..

4

HySA: a Hybrid Structural variant Assembly approach using n..:

Fan, Xian ; Chaisson, Mark ; Nakhleh, Luay.
Genome Research. 27 (2017) 5 - p. 793-800 , 2017

Link: https://doi.org/10.1101/..

5

Assembly of long error-prone reads using de Bruijn graphs:

Lin, Yu ; Yuan, Jeffrey ; Kolmogorov, Mikhail...
Proceedings of the National Academy of Sciences. 113 (2016) 52 - p. , 2016

Link: https://doi.org/10.1073/..

6

Assembly of long error-prone reads using de Bruijn graphs:

Lin, Yu ; Yuan, Jeffrey ; Kolmogorov, Mikhail...
Proceedings of the National Academy of Sciences of the United States of America. 113 (2016) 52 - p. E8396-E8405 , 2016

Link: https://www.jstor.org/st..

7

Reconstructing complex regions of genomes using long-read s..:

Huddleston, John ; Ranade, Swati ; Malig, Maika...
Genome Research. 24 (2014) 4 - p. 688-696 , 2014

Link: https://doi.org/10.1101/..

8

Mapping single molecule sequencing reads using basic local ..:

Chaisson, Mark J ; Tesler, Glenn
BMC Bioinformatics. 13 (2012) 1 - p. , 2012

Link: https://doi.org/10.1186/..

9

STAR: ultrafast universal RNA-seq aligner:

Dobin, Alexander ; Davis, Carrie A. ; Schlesinger, Felix...
Bioinformatics. 29 (2012) 1 - p. 15-21 , 2012

Link: https://doi.org/10.1093/..

10

De novo fragment assembly with short mate-paired reads: Doe..:

Chaisson, Mark J. ; Brinza, Dumitru ; Pevzner, Pavel A.
Genome Research. 19 (2008) 2 - p. 336-346 , 2008

Link: https://doi.org/10.1101/..

11

Short read fragment assembly of bacterial genomes:

Chaisson, Mark J. ; Pevzner, Pavel A.
Genome Research. 18 (2007) 2 - p. 324-330 , 2007

Link: https://doi.org/10.1101/..

12

Fragment assembly with short reads:

Chaisson, Mark ; Pevzner, Pavel ; Tang, Haixu
Bioinformatics. 20 (2004) 13 - p. 2067-2074 , 2004

Link: https://doi.org/10.1093/..

13

Chromosome level genome assembly of the Etruscan shrew Sunc..:

Bukhman, Yury V. ; Meyer, Susanne ; Chu, Li-Fang...
Scientific Data. 11 (2024) 1 - p. , 2024

Link: https://doi.org/10.1038/..

14

Analysis and benchmarking of small and large genomic varian..:

English, Adam C. ; Dolzhenko, Egor ; Ziaei Jam, Helyaneh...
Nature Biotechnology. , 2024

Link: https://doi.org/10.1038/..

15

Scalable, accessible and reproducible reference genome asse..:

Larivière, Delphine ; Abueg, Linelle ; Brajuka, Nadolina...
Nature Biotechnology. , 2024

Link: https://doi.org/10.1038/..