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Peter F. Stadler (Department of Theoretical Chemistry, Facu ...
93
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1
Bi-alignments with affine gaps costs:
Peter F. Stadler (Department of Theoretical Chemistry, Faculty of Chemistry, University of Vienna)
;
Sebastian Will (AMIBio, Laboratoire d'Informatique de l'École Polytechnique (LIX), Institute Polytechnique de Paris (IP Paris))
hdl:11353/10.1667181. , 2022
Link:
https://doi.org/10.1186/..
?
2
ExceS-A: an exon-centric split aligner:
Franziska Reinhardt (Bioinformatics Group, Institute of Computer Science, Interdisciplinary Center of Bioinformatics, Leipzig University)
;
Peter F. Stadler (Department of Theoretical Chemistry, Faculty of Chemistry, University of Vienna)
hdl:11353/10.1660096. , 2022
Link:
https://doi.org/10.1515/..
?
3
Manipulating base quality scores enables variant calling fr..:
Adam Nunn (ecSeq Bioinformatics GmbH)
;
Christian Otto (ecSeq Bioinformatics GmbH)
;
Mario Fasold (ecSeq Bioinformatics GmbH)
..
hdl:11353/10.1670466. , 2022
Link:
https://doi.org/10.1186/..
?
4
Cas1 and Fen1 Display Equivalent Functions During Archaeal ..:
Julia Wörtz (Biology II, Ulm University)
;
Victoria Smith (School of Life Sciences, University of Nottingham)
;
Jörg Fallmann (Department of Computer Science, Bioinformatics Group, Interdisciplinary Center for Bioinformatics, University of Leipzig)
...
hdl:11353/10.1666683. , 2022
Link:
https://doi.org/10.3389/..
?
5
What makes a reaction network "chemical"?:
Stefan Müller (Faculty of Mathematics, University of Vienna)
;
Christoph Flamm (Department of Theoretical Chemistry, Faculty of Chemistry, University of Vienna)
;
Peter F. Stadler (Department of Theoretical Chemistry, Faculty of Chemistry, University of Vienna)
hdl:11353/10.1674719. , 2022
Link:
https://doi.org/10.1186/..
?
6
Generalized Fitch Graphs III: Symmetrized Fitch maps and Se..:
Marc Hellmuth (Department of Mathematics, Stockholm University)
;
Carsten R. Seemann (Max Planck Institute for Mathematics in the Sciences)
;
Peter F. Stadler (Department of Theoretical Chemistry, Faculty of Chemistry, University of Vienna)
hdl:11353/10.1614466. , 2021
Link:
https://doi.org/10.46298..
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7
A workflow to identify novel proteins based on the direct m..:
John Anders (Bioinformatics Group, Department of Computer Science, and Interdisciplinary Center for Bioinformatics, Universität Leipzig)
;
Hannes Petruschke (Department of Molecular Systems Biology, Helmholtz Centre for Environmental Research - UFZ)
;
Nico Jehmlich (Department of Molecular Systems Biology, Helmholtz Centre for Environmental Research - UFZ)
...
hdl:11353/10.1615619. , 2021
Link:
https://doi.org/10.1186/..
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8
Lifestyle weight-loss intervention may attenuate methylatio..:
Anat Yaskolka Meir (Department of Public Health, Faculty of Health Sciences, Ben-Gurion University of the Negev)
;
Maria Keller (Helmholtz Institute for Metabolic, Obesity and Vascular Research (HI-MAG) of the Helmholtz Center Munich at the University of Leipzig and University Hospital Leipzig)
;
Stephan H. Bernhart (Interdisciplinary Center for Bioinformatics, University of Leipzig)
...
hdl:11353/10.1622218. , 2021
Link:
https://doi.org/10.1186/..
?
9
LazyB: fast and cheap genome assembly:
Thomas Gatter (Bioinformatics Group, Department of Computer Science, and Interdisciplinary Center for Bioinformatics, Universität Leipzig)
;
Sarah von Löhneysen (Bioinformatics Group, Department of Computer Science, and Interdisciplinary Center for Bioinformatics, Universität Leipzig)
;
Jörg Fallmann (Bioinformatics Group, Department of Computer Science, and Interdisciplinary Center for Bioinformatics, Universität Leipzig)
...
hdl:11353/10.1614474. , 2021
Link:
https://doi.org/10.1186/..
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10
Competing Endogenous RNA in Colorectal Cancer: An Analysis ..:
Lucas Maciel Vieira (Departamento de Ciência da Computação, Instituto de Ciência Exatas, University of Brasília)
;
Natasha Andressa Nogueira Jorge (Bioinformatics Group, Department of Computer Science, and Interdisciplinary Center for Bioinformatics)
;
João Batista de Sousa (Division of Coloproctology, Department of Surgery, University of Brasília School of Medicine)
...
hdl:11353/10.1613899. , 2021
Link:
https://doi.org/10.3389/..
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11
Heuristic algorithms for best match graph editing:
David Schaller (Max Planck Institute for Mathematics in the Sciences)
;
Manuela Geiß (Software Competence Center Hagenberg GmbH)
;
Marc Hellmuth (Department of Mathematics, Faculty of Science, Stockholm University)
.
hdl:11353/10.1603277. , 2021
Link:
https://doi.org/10.1186/..
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12
Accelerated Evolution of Tissue-Specific Genes Mediates Div..:
Sree Rohit Raj Kolora (German Centre for Integrative Biodiversity Research (iDiv) Halle Jena Leipzig)
;
Deisy Morselli Gysi (Bioinformatics Group, Department of Computer Science, and Interdisciplinary Center for Bioinformatics, Universität Leipzig)
;
Stefan Schaffer (German Centre for Integrative Biodiversity Research (iDiv) Halle Jena Leipzig)
...
hdl:11353/10.1603859. , 2021
Link:
https://doi.org/10.1093/..
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13
Thermal reaction norms of key metabolic enzymes reflect div..:
Lena Jakob (Department of Integrative Ecophysiology, Alfred Wegener Institute, Helmholtz Centre for Polar and Marine Research)
;
Kseniya P. Vereshchagina (Institute of Biology, Irkutsk State University)
;
Anette Tillmann (Department of Integrative Ecophysiology, Alfred Wegener Institute, Helmholtz Centre for Polar and Marine Research)
...
hdl:11353/10.1622263. , 2021
Link:
https://doi.org/10.1038/..
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14
miRNAture—Computational Detection of microRNA Candidates:
Cristian A. Velandia-Huerto (Bioinformatics Group, Department of Computer Science, and Interdisciplinary Center for Bioinformatics, Leipzig University)
;
Jörg Fallmann (Bioinformatics Group, Department of Computer Science, and Interdisciplinary Center for Bioinformatics, Leipzig University)
;
Peter F. Stadler (Department of Theoretical Chemistry, Faculty of Chemistry, University of Vienna)
hdl:11353/10.1622252. , 2021
Link:
https://doi.org/10.3390/..
?
15
EpiDiverse Toolkit: a pipeline suite for the analysis of bi..:
Adam Nunn (ecSeq Bioinformatics GmbH)
;
Sultan Nilay Can (Deparment of Biology, University of Marburg)
;
Christian Otto (ecSeq Bioinformatics GmbH)
...
hdl:11353/10.1596148. , 2021
Link:
https://doi.org/10.1093/..
1-15