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Treangen, Todd J
200  Ergebnisse:
Personensuche X
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1

Reference-free structural variant detection in microbiomes ..:

Curry, Kristen D ; Yu, Feiqiao Brian ; Vance, Summer E...
Bioinformatics.  40 (2024)  Supplement_1 - p. i58-i67 , 2024
Link: https://doi.org/10.1093/..
 
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2

MethPhaser: methylation-based long-read haplotype phasing o..:

Fu, Yilei ; Aganezov, Sergey ; Mahmoud, Medhat...
Nature Communications.  15 (2024)  1 - p. , 2024
Link: https://doi.org/10.1038/..
 
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3

PreK-12 school and citywide wastewater monitoring of the en..:

Wolken, Madeline ; Wang, Michael ; Schedler, Julia...
Science of The Total Environment.  931 (2024)  - p. 172683 , 2024
Link: https://doi.org/10.1016/..
 
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4

Crykey: Rapid identification of SARS-CoV-2 cryptic mutation..:

Liu, Yunxi ; Sapoval, Nicolae ; Gallego-García, Pilar...
Nature Communications.  15 (2024)  1 - p. , 2024
Link: https://doi.org/10.1038/..
 
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5

The pan-microbiome profiling system Taxa4Meta identifies cl..:

Wu, Qinglong ; Badu, Shyam ; So, Sik Yu..
Journal of Clinical Investigation.  134 (2024)  2 - p. , 2024
Link: https://doi.org/10.1172/..
 
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6

Microbial Community Profiling Protocol with Full‐length 16S..:

Curry, Kristen D. ; Soriano, Sirena ; Nute, Michael G....
Current Protocols.  4 (2024)  3 - p. , 2024
Link: https://doi.org/10.1002/..
 
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7

GraSSRep: Graph-Based Self-supervised Learning for Repeat D..:

, In: Lecture Notes in Computer Science; Research in Computational Molecular Biology,
Azizpour, Ali ; Balaji, Advait ; Treangen, Todd J.. - p. 372-376 , 2024
Link: https://doi.org/10.1007/..
 
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8

Identification of a novel CG307 sub-clade in third-generati..:

Selvaraj Anand, Selvalakshmi ; Wu, Chin-Ting ; Bremer, Jordan...
Microbial Genomics.  10 (2024)  2 - p. , 2024
Link: https://doi.org/10.1099/..
 
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9

Parsnp 2.0: scalable core-genome alignment for massive micr..:

Kille, Bryce ; Nute, Michael G ; Huang, Victor...
Bioinformatics.  40 (2024)  5 - p. , 2024
Link: https://doi.org/10.1093/..
 
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10

Sensitivity and consistency of long- and short-read metagen..:

Lou, Esther G. ; Fu, Yilei ; Wang, Qi..
Journal of Hazardous Materials.  469 (2024)  - p. 133939 , 2024
Link: https://doi.org/10.1016/..
 
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11

Improved understanding of biorisk for research involving mi..:

Godbold, Gene D. ; Hewitt, F. Curtis ; Kappell, Anthony D....
Frontiers in Bioengineering and Biotechnology.  11 (2023)  - p. , 2023
Link: https://doi.org/10.3389/..
 
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12

SeqScreen-Nano: a computational platform for streaming, in-..:

, In: Proceedings of the 14th ACM International Conference on Bioinformatics, Computational Biology, and Health Informatics,
Balaji, Advait ; Liu, Yunxi ; Nute, Michael G.... - p. 1-10 , 2023
Link: https://dl.acm.org/doi/1..
 
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13

Targeted Metagenomic Sequencing for Detection of Vertebrate..:

McCall, Camille ; Leo Elworth, Ryan A. ; Wylie, Kristine M....
ACS ES&T Water.  3 (2023)  9 - p. 2955-2965 , 2023
Link: https://doi.org/10.1021/..
 
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14

Leveraging Large Language Models for Predicting Microbial V..:

, In: Proceedings of the 14th ACM International Conference on Bioinformatics, Computational Biology, and Health Informatics,
Quintana, Felix ; Treangen, Todd ; Kavraki, Lydia - p. 1-6 , 2023
Link: https://dl.acm.org/doi/1..
 
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15

Bakdrive: identifying a minimum set of bacterial species dr..:

Wang, Qi ; Nute, Michael ; Treangen, Todd J
Bioinformatics.  39 (2023)  Supplement_1 - p. i47-i56 , 2023
Link: https://doi.org/10.1093/..
 
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