E-LIB Suche - Ergebnisse für: Vreede, Jocelyne

1

Enhanced sampling strategies for molecular simulation of DN:

Mohr, Bernadette ; van Heesch, Thor ; Pérez de Alba Ortíz, Alberto.
WIREs Computational Molecular Science. 14 (2024) 2 - p. , 2024

Link: https://doi.org/10.1002/..

2

Bacterial histone HBb from Bdellovibrio bacteriovorus compa..:

Hu, Yimin ; Schwab, Samuel ; Deiss, Silvia...
Nucleic Acids Research. , 2024

Link: https://doi.org/10.1093/..

3

Binding Dynamics of a Stapled Peptide Targeting the Transcr..:

Durukan, Canan ; Arbore, Federica ; Klintrot, Rasmus...
ChemBioChem. 25 (2024) 9 - p. , 2024

Link: https://doi.org/10.1002/..

4

Decoding dissociation of sequence-specific protein–DNA comp..:

van Heesch, Thor ; Bolhuis, Peter G ; Vreede, Jocelyne
Nucleic Acids Research. 51 (2023) 22 - p. 12150-12160 , 2023

Link: https://doi.org/10.1093/..

5

Rigid Base Biasing in Molecular Dynamics Enables Enhanced S..:

Voorspoels, Aderik ; Vreede, Jocelyne ; Carlon, Enrico
Journal of Chemical Theory and Computation. 19 (2023) 3 - p. 902-909 , 2023

Link: https://doi.org/10.1021/..

6

Path Sampling Simulations Reveal How the Q61L Mutation Alte..:

Roet, Sander ; Hooft, Ferry ; Bolhuis, Peter G...
The Journal of Physical Chemistry B. 126 (2022) 48 - p. 10034-10044 , 2022

Link: https://doi.org/10.1021/..

7

Sequence dependence of transient Hoogsteen base pairing in ..:

Pérez de Alba Ortíz, Alberto ; Vreede, Jocelyne ; Ensing, Bernd.
PLOS Computational Biology. 18 (2022) 5 - p. e1010113 , 2022

Link: https://doi.org/10.1371/..

8

The role of acidic amino acids in the hydration and stabili..:

Geraili Daronkola, Hosein , 2021

Link: https://nbn-resolving.de..

9

Predicting the Structure and Dynamics of Membrane Protein G..:

Blinker, Sophie ; Vreede, Jocelyne ; Setlow, Peter.
International Journal of Molecular Sciences. 22 (2021) 7 - p. 3793 , 2021

Link: https://doi.org/10.3390/..

10

Length-scale-dependent elasticity in DNA from coarse-graine..:

Skoruppa, Enrico ; Voorspoels, Aderik ; Vreede, Jocelyne.
Physical Review E. 103 (2021) 4 - p. , 2021

Link: https://doi.org/10.1103/..

11

Structural basis for osmotic regulation of the DNA binding ..:

Dame, Remus T ; Ubbink, Marcellus ; van Schaik, Peter...
Nucleic Acids Research. 48 (2020) 4 - p. 2156-2172 , 2020

Link: https://doi.org/10.1093/..

12

Predicting the mechanism and rate of H-NS binding to AT-ric..:

Riccardi, Enrico ; van Mastbergen, Eva C. ; Navarre, William Wiley..
PLOS Computational Biology. 15 (2019) 3 - p. e1006845 , 2019

Link: https://doi.org/10.1371/..

13

Atomistic insight into the kinetic pathways for Watson–Cric..:

Vreede, Jocelyne ; Pérez de Alba Ortíz, Alberto ; Bolhuis, Peter G.
Nucleic Acids Research. 47 (2019) 21 - p. 11069-11076 , 2019

Link: https://doi.org/10.1093/..

14

Highlights of (bio-)chemical tools and visualization softwa..:

Dubbeldam, David ; Vreede, Jocelyne ; Vlugt, Thijs JH.
Current Opinion in Chemical Engineering. 23 (2019) - p. 1-13 , 2019

Link: https://doi.org/10.1016/..

15

Allostery in Its Many Disguises: From Theory to Application:

Wodak, Shoshana J. ; Paci, Emanuele ; Dokholyan, Nikolay V....
Structure. 27 (2019) 4 - p. 566-578 , 2019

Link: https://doi.org/10.1016/..