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Erik Garrison
316
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Online (316)
Mediatypes
Articles (Online) (50)
Bookchapter (Online) (1)
OpenAccess-fulltext (265)
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1
Protocol for preparing Drosophila genomic DNA to create chr..:
Sperling, Alexis L.
;
Fabian, Daniel K.
;
Garrison, Erik
.
STAR Protocols. 5 (2024) 2 - p. 102974 , 2024
Link:
https://doi.org/10.1016/..
?
2
A revamped rat reference genome improves the discovery of g..:
de Jong, Tristan V.
;
Pan, Yanchao
;
Rastas, Pasi
...
Cell Genomics. 4 (2024) 4 - p. 100527 , 2024
Link:
https://doi.org/10.1016/..
?
3
Pangenome graph layout by Path-Guided Stochastic Gradient D..:
Heumos, Simon
;
Guarracino, Andrea
;
Schmelzle, Jan-Niklas M
...
Bioinformatics. 40 (2024) 7 - p. , 2024
Link:
https://doi.org/10.1093/..
?
4
Haplotype-aware pantranscriptome analyses using spliced pan..:
Sibbesen, Jonas A.
;
Eizenga, Jordan M.
;
Novak, Adam M.
...
Nature Methods. 20 (2023) 2 - p. 239-247 , 2023
Link:
https://doi.org/10.1038/..
?
5
A genetic basis for facultative parthenogenesis in Drosophi..:
Sperling, Alexis L.
;
Fabian, Daniel K.
;
Garrison, Erik
.
Current Biology. 33 (2023) 17 - p. 3545-3560.e13 , 2023
Link:
https://doi.org/10.1016/..
?
6
The complete sequence of a human Y chromosome:
Rhie, Arang
;
Nurk, Sergey
;
Cechova, Monika
...
Nature. 621 (2023) 7978 - p. 344-354 , 2023
Link:
https://doi.org/10.1038/..
?
7
Pangenome graphs in infectious disease: a comprehensive gen..:
Yang, Zuyu
;
Guarracino, Andrea
;
Biggs, Patrick J.
...
Frontiers in Genetics. 14 (2023) - p. , 2023
Link:
https://doi.org/10.3389/..
?
8
Optimal gap-affine alignment in O(s) space:
Marco-Sola, Santiago
;
Eizenga, Jordan M
;
Guarracino, Andrea
...
Bioinformatics. 39 (2023) 2 - p. , 2023
Link:
https://doi.org/10.1093/..
?
9
A super-pangenome of the North American wild grape species:
Cochetel, Noé
;
Minio, Andrea
;
Guarracino, Andrea
...
Genome Biology. 24 (2023) 1 - p. , 2023
Link:
https://doi.org/10.1186/..
?
10
Minmers are a generalization of minimizers that enable unbi..:
Kille, Bryce
;
Garrison, Erik
;
Treangen, Todd J
..
Bioinformatics. 39 (2023) 9 - p. , 2023
Link:
https://doi.org/10.1093/..
?
11
Unbiased pangenome graphs:
Garrison, Erik
;
Guarracino, Andrea
;
Alkan, Can
Bioinformatics. 39 (2022) 1 - p. , 2022
Link:
https://doi.org/10.1093/..
?
12
A spectrum of free software tools for processing the VCF va..:
Garrison, Erik
;
Kronenberg, Zev N.
;
Dawson, Eric T.
...
PLOS Computational Biology. 18 (2022) 5 - p. e1009123 , 2022
Link:
https://doi.org/10.1371/..
?
13
ODGI: understanding pangenome graphs:
Guarracino, Andrea
;
Heumos, Simon
;
Nahnsen, Sven
...
Bioinformatics. 38 (2022) 13 - p. 3319-3326 , 2022
Link:
https://doi.org/10.1093/..
?
14
Pangenomics enables genotyping of known structural variants..:
Sirén, Jouni
;
Monlong, Jean
;
Chang, Xian
...
Science. 374 (2021) 6574 - p. , 2021
Link:
https://doi.org/10.1126/..
?
15
Landscape and selection of vaccine epitopes in SARS-CoV-2:
Smith, Christof C.
;
Olsen, Kelly S.
;
Gentry, Kaylee M.
...
Genome Medicine. 13 (2021) 1 - p. , 2021
Link:
https://doi.org/10.1186/..
1-15