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Ballweber Fleming, Lamar
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1

Innate immune signatures to a partially-efficacious HIV vac..:

Erica Andersen-Nissen ; Andrew Fiore-Gartland ; Lamar Ballweber Fleming...
https://doi.org/10.1371/journal.ppat.1009363.  , 2021
Link: https://doi.org/10.1371/..
 
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2

Rectal tissue and vaginal tissue from intravenous VRC01 rec..:

Astronomo, Rena D ; Lemos, Maria P ; Narpala, Sandeep R...
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC8363291/.  , 2021
Link: http://www.ncbi.nlm.nih...
 
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3

Human immunoglobulin gene allelic variation impacts germlin..:

deCamp, Allan C ; Corcoran, Martin M ; Fulp, William J...
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC10055468/.  , 2023
Link: http://www.ncbi.nlm.nih...
 
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4

http://sieve.fredhutch.org/viz/VTN097 Interactive UMAP figu..:

Erica Andersen-Nissen (8881685) ; Andrew Fiore-Gartland (849286) ; Lamar Ballweber Fleming (10305199)...
https://figshare.com/articles/dataset/http_sieve_fredhutch_org_viz_VTN097_Interactive_UMAP_figure_showing_the_correlation_of_Day_1_Day_3_and_Day_7_log2_fold-change_of_each_DEG_with_Month_6_5_V1V2-targeted_antibody-dependent_cellular_phagocytosis_ADCP_activity_/14217517.  , 2021
Link: https://doi.org/10.1371/..
 
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5

Immune system functions in which the DEGs shared between Da..:

Erica Andersen-Nissen (8881685) ; Andrew Fiore-Gartland (849286) ; Lamar Ballweber Fleming (10305199)...
https://figshare.com/articles/journal_contribution/Immune_system_functions_in_which_the_DEGs_shared_between_Days_1_and_3_are_involved_/14217460.  , 2021
Link: https://doi.org/10.1371/..
 
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6

Strong associations between Day 1 changes in gene expressio..:

Erica Andersen-Nissen (8881685) ; Andrew Fiore-Gartland (849286) ; Lamar Ballweber Fleming (10305199)...
https://figshare.com/articles/figure/Strong_associations_between_Day_1_changes_in_gene_expression_and_Month_6_5_Env-specific_antibody-dependent_cellular_phagocytosis_ADCP_responses_/14217535.  , 2021
Link: https://doi.org/10.1371/..
 
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7

Demographic data from all HVTN 097 participants and from th..:

Erica Andersen-Nissen (8881685) ; Andrew Fiore-Gartland (849286) ; Lamar Ballweber Fleming (10305199)...
https://figshare.com/articles/journal_contribution/Demographic_data_from_all_HVTN_097_participants_and_from_the_subset_of_participants_for_whom_PBMC_transcriptional_profiling_was_performed_median_and_IQR_/14217487.  , 2021
Link: https://doi.org/10.1371/..
 
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8

Pairwise rank-based correlations among the fold-changes in ..:

Erica Andersen-Nissen (8881685) ; Andrew Fiore-Gartland (849286) ; Lamar Ballweber Fleming (10305199)...
https://figshare.com/articles/journal_contribution/Pairwise_rank-based_correlations_among_the_fold-changes_in_concentration_at_Day_1_of_the_six_serum_factors_that_showed_significant_changes_post-vaccination_/14217472.  , 2021
Link: https://doi.org/10.1371/..
 
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9

Listing of correlation testing results including: (1) fold-..:

Erica Andersen-Nissen (8881685) ; Andrew Fiore-Gartland (849286) ; Lamar Ballweber Fleming (10305199)...
https://figshare.com/articles/dataset/Listing_of_correlation_testing_results_including_1_fold-change_in_serum_cytokines_vs_adaptive_responses_2_fold-change_of_the_11_signature_gene_modules_vs_adaptive_responses_3_fold-change_in_expression_of_differentially_expressed_genes_vs_ad/14217499.  , 2021
Link: https://doi.org/10.1371/..
 
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10

http://sieve.fredhutch.org/viz/VTN097 Interactive UMAP figu..:

Erica Andersen-Nissen (8881685) ; Andrew Fiore-Gartland (849286) ; Lamar Ballweber Fleming (10305199)...
https://figshare.com/articles/dataset/http_sieve_fredhutch_org_viz_VTN097_Interactive_UMAP_figure_showing_the_correlation_of_Day_1_Day_3_and_Day_7_log2_fold-change_of_each_DEG_with_Month_6_5_top_panels_or_Month_12_bottom_panels_IgG_binding_antibody_BAMA_activity_as_measured_by_/14217508.  , 2021
Link: https://doi.org/10.1371/..
 
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11

Specimen collection for immune response evaluation in the a..:

Erica Andersen-Nissen (8881685) ; Andrew Fiore-Gartland (849286) ; Lamar Ballweber Fleming (10305199)...
https://figshare.com/articles/figure/Specimen_collection_for_immune_response_evaluation_in_the_active_groups_in_the_HVTN_097_trial_/14217526.  , 2021
Link: https://doi.org/10.1371/..
 
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12

http://sieve.fredhutch.org/viz/VTN097 Interactive volcano p..:

Erica Andersen-Nissen (8881685) ; Andrew Fiore-Gartland (849286) ; Lamar Ballweber Fleming (10305199)...
https://figshare.com/articles/dataset/http_sieve_fredhutch_org_viz_VTN097_Interactive_volcano_plot_showing_differentially_expressed_genes_at_Days_1_3_and_7_post-first_ALVAC-HIV_vaccination_/14217502.  , 2021
Link: https://doi.org/10.1371/..
 
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13

References for modular transcriptional Gene Set Enrichment ..:

Erica Andersen-Nissen (8881685) ; Andrew Fiore-Gartland (849286) ; Lamar Ballweber Fleming (10305199)...
https://figshare.com/articles/journal_contribution/References_for_modular_transcriptional_Gene_Set_Enrichment_GSEA_/14217496.  , 2021
Link: https://doi.org/10.1371/..
 
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14

Listing of all differentially expressed genes (DEGs) along ..:

Erica Andersen-Nissen (8881685) ; Andrew Fiore-Gartland (849286) ; Lamar Ballweber Fleming (10305199)...
https://figshare.com/articles/dataset/Listing_of_all_differentially_expressed_genes_DEGs_along_with_module_count_modules_and_log_sub_2_sub_-fold-change_on_Day_1_Day_3_and_Day_7_/14217493.  , 2021
Link: https://doi.org/10.1371/..
 
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15

Correlations of RNAseq data with ddPCR data for (A) STAT1 ,..:

Erica Andersen-Nissen (8881685) ; Andrew Fiore-Gartland (849286) ; Lamar Ballweber Fleming (10305199)...
https://figshare.com/articles/journal_contribution/Correlations_of_RNAseq_data_with_ddPCR_data_for_A_i_STAT1_i_B_i_OAS1_i_and_C_i_IRF1_i_on_Day_0_left_column_Day_1_middle_column_and_Day_3_right_column_/14217463.  , 2021
Link: https://doi.org/10.1371/..
 
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