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Bussi, Giovanni
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1

Atomistic Picture of Opening–Closing Dynamics of DNA Hollid..:

Zhang, Zhengyue ; Šponer, Jiří ; Bussi, Giovanni...
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC10170514/.  , 2023
Link: http://www.ncbi.nlm.nih...
 
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2

PARALLEL G-QUADRUPLEX FOLDS VIA MULTIPLE PATHS INVOLVING G-..:

Pokorná, Pavlína ; Mlýnský, Vojtěch ; Bussi, Giovanni..
doi:10.5281/zenodo.8247280.  , 2023
Link: https://zenodo.org/recor..
 
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3

Boosting ensemble refinement with transferable force field ..:

Gilardoni, Ivan ; Fröhlking, Thorben ; Bussi, Giovanni
http://arxiv.org/abs/2311.13532.  , 2023
Link: http://arxiv.org/abs/231..
 
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4

Atomistic Picture of Opening–Closing Dynamics of DNA Hollid..:

Zhang, Zhengyue ; Šponer, Jiří ; Bussi, Giovanni...
journal:JOURNAL OF CHEMICAL INFORMATION AND MODELING.  , 2023
Link: https://hdl.handle.net/2..
 
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5

Molecular Dynamics Simulations with Grand-Canonical Reweigh..:

Calonaci, Nicola ; Bernetti, Mattia ; Jones, Alisha..
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC10308816/.  , 2023
Link: http://www.ncbi.nlm.nih...
 
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6

Refinement of molecular dynamics ensembles using experiment..:

Fröhlking, Thorben ; Bernetti, Mattia ; Bussi, Giovanni
http://arxiv.org/abs/2303.09372.  , 2023
Link: http://arxiv.org/abs/230..
 
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7

Automatic Learning of Hydrogen-Bond Fixes in the AMBER RNA ..:

Fröhlking, Thorben ; Mlýnský, Vojtěch ; Janeček, Michal...
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC9281393/.  , 2022
Link: http://www.ncbi.nlm.nih...
 
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8

Automatic learning of hydrogen-bond fixes in an AMBER RNA f..:

Fröhlking, Thorben ; Mlýnský, Vojtěch ; Janeček, Michal...
http://arxiv.org/abs/2201.04078.  , 2022
Link: http://arxiv.org/abs/220..
 
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9

Automatic Learning of Hydrogen-Bond Fixes in the AMBER RNA ..:

Froehlking, Thorben ; Mlýnský, Vojtěch ; Janeček, Michal...
info:eu-repo/semantics/altIdentifier/pmid/35699952.  , 2022
Link: https://hdl.handle.net/2..
 
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10

Molecular dynamics simulations with grand-canonical reweigh..:

Calonaci, Nicola ; Bernetti, Mattia ; Jones, Alisha..
http://arxiv.org/abs/2209.12640.  , 2022
Link: http://arxiv.org/abs/220..
 
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11

Molecular simulations matching denaturation experiments for..:

Piomponi Valerio ; Bussi Giovanni ; Thorben Froehlking.
doi:10.5281/zenodo.6498020.  , 2022
Link: https://zenodo.org/recor..
 
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12

Exploration, representation and rationalization of the conf..:

Grothaus, Isabell ; Bussi, Giovanni ; Colombi Ciacci, Lucio
info:eu-repo/grantAgreement/EC/H2020/730897/.  , 2022
Link: https://zenodo.org/recor..
 
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13

Adding alchemical variables to metadynamics to enhance samp..:

Hsu, Wei-Tse ; Piomponi, Valerio ; Merz, Pascal T..
http://arxiv.org/abs/2206.01329.  , 2022
Link: http://arxiv.org/abs/220..
 
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14

Biomotors, viral assembly, and RNA nanobiotechnology: Curre..:

Rolband, Lewis ; Beasock, Damian ; Wang, Yang...
info:eu-repo/semantics/altIdentifier/wos/WOS:000953909300005.  , 2022
Link: https://hdl.handle.net/2..
 
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15

PLUMED: a portable plugin for free-energy calculations with..:

Bonomi, Massimiliano ; Branduardi, Davide ; Bussi, Giovanni...
info:eu-repo/semantics/altIdentifier/arxiv/0902.0874.  , 2022
Link: https://hal.archives-ouv..
 
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