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Afanassiev, Anton
29
results:
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Online (29)
Mediatypes
Articles (Online) (5)
OpenAccess-fulltext (24)
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1
DNA-GPS: A theoretical framework for optics-free spatial ge..:
Greenstreet, Laura
;
Afanassiev, Anton
;
Kijima, Yusuke
...
Cell Systems. 14 (2023) 10 - p. 844-859.e4 , 2023
Link:
https://doi.org/10.1016/..
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2
Brassinosteroid gene regulatory networks at cellular resolu..:
Nolan, Trevor M.
;
Vukašinović, Nemanja
;
Hsu, Che-Wei
...
Science. 379 (2023) 6639 - p. , 2023
Link:
https://doi.org/10.1126/..
?
3
A single-cell Arabidopsis root atlas reveals developmental ..:
Shahan, Rachel
;
Hsu, Che-Wei
;
Nolan, Trevor M.
...
Developmental Cell. 57 (2022) 4 - p. 543-560.e9 , 2022
Link:
https://doi.org/10.1016/..
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4
2017 – HUMAN HEMATOPOIETIC STEM CELL ONTOGENY ACROSS DEVELO..:
Rowe, Grant
;
Li, Hojun
;
Cote, Parker
...
Experimental Hematology. 111 (2022) - p. S39-S40 , 2022
Link:
https://doi.org/10.1016/..
?
5
Optimal transport analysis reveals trajectories in steady-s..:
Zhang, Stephen
;
Afanassiev, Anton
;
Greenstreet, Laura
...
PLOS Computational Biology. 17 (2021) 12 - p. e1009466 , 2021
Link:
https://doi.org/10.1371/..
?
6
A single cell Arabidopsis root atlas reveals developmental ..:
Shahan, Rachel
;
Hsu, Che-Wei
;
Nolan, Trevor M
...
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC9014886/. , 2022
Link:
http://www.ncbi.nlm.nih...
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7
Developmental single-cell transcriptomics in the Lytechinus..:
Massri, Abdull J
;
Greenstreet, Laura
;
Afanassiev, Anton
...
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC8502253/. , 2021
Link:
http://www.ncbi.nlm.nih...
?
8
Optimal transport analysis reveals trajectories in steady-s..:
Stephen Zhang
;
Anton Afanassiev
;
Laura Greenstreet
..
https://doi.org/10.1371/journal.pcbi.1009466. , 2021
Link:
https://doi.org/10.1371/..
?
9
Non-conservative simulation:
Stephen Zhang (11790899)
;
Anton Afanassiev (11790902)
;
Laura Greenstreet (11790905)
..
https://figshare.com/articles/figure/Non-conservative_simulation_/17123834. , 2021
Link:
https://doi.org/10.1371/..
?
10
Effect of parameter choices on inference for potential-driv..:
Stephen Zhang (11790899)
;
Anton Afanassiev (11790902)
;
Laura Greenstreet (11790905)
..
https://figshare.com/articles/figure/Effect_of_parameter_choices_on_inference_for_potential-driven_system_/17123828. , 2021
Link:
https://doi.org/10.1371/..
?
11
Lineage annotation compared to cell fate probabilities for ..:
Stephen Zhang (11790899)
;
Anton Afanassiev (11790902)
;
Laura Greenstreet (11790905)
..
https://figshare.com/articles/figure/Lineage_annotation_compared_to_cell_fate_probabilities_for_both_StationaryOT_methods_PBA_and_CellRank_/17123807. , 2021
Link:
https://doi.org/10.1371/..
?
12
Inferred dynamics in the space of paths for non-conservativ..:
Stephen Zhang (11790899)
;
Anton Afanassiev (11790902)
;
Laura Greenstreet (11790905)
..
https://figshare.com/articles/figure/Inferred_dynamics_in_the_space_of_paths_for_non-conservative_system_/17123837. , 2021
Link:
https://doi.org/10.1371/..
?
13
Output of StationaryOT on full atlas dataset:
Stephen Zhang (11790899)
;
Anton Afanassiev (11790902)
;
Laura Greenstreet (11790905)
..
https://figshare.com/articles/figure/Output_of_StationaryOT_on_full_atlas_dataset_/17123855. , 2021
Link:
https://doi.org/10.1371/..
?
14
Conceptual illustration of inference problem:
Stephen Zhang (11790899)
;
Anton Afanassiev (11790902)
;
Laura Greenstreet (11790905)
..
https://figshare.com/articles/figure/Conceptual_illustration_of_inference_problem_/17123816. , 2021
Link:
https://doi.org/10.1371/..
?
15
Arabidopsis atlas cell annotations and StationaryOT output:
Stephen Zhang (11790899)
;
Anton Afanassiev (11790902)
;
Laura Greenstreet (11790905)
..
https://figshare.com/articles/figure/_i_Arabidopsis_i_atlas_cell_annotations_and_StationaryOT_output_/17123846. , 2021
Link:
https://doi.org/10.1371/..
1-15