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Agata P Perlinska
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1

Are there double knots in proteins? Prediction and in vitro..:

Perlinska, Agata P. ; Nguyen, Mai Lan ; Pilla, Smita P....
Frontiers in Molecular Biosciences.  10 (2024)  - p. , 2024
Link: https://doi.org/10.3389/..
 
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2

AlphaKnot 2.0: a web server for the visualization of protei..:

Rubach, Pawel ; Sikora, Maciej ; Jarmolinska, Aleksandra I..
Nucleic Acids Research.  52 (2024)  W1 - p. W187-W193 , 2024
Link: https://doi.org/10.1093/..
 
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3

Knot or not? Identifying unknotted proteins in knotted fami..:

Sikora, Maciej ; Klimentova, Eva ; Uchal, Dawid...
Protein Science.  33 (2024)  7 - p. , 2024
Link: https://doi.org/10.1002/..
 
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4

Nucleolar Essential Protein 1 (Nep1): Elucidation of enzyma..:

Jedrzejewski, Mateusz ; Belza, Barbara ; Lewandowska, Iwona...
Computational and Structural Biotechnology Journal.  21 (2023)  - p. 3999-4008 , 2023
Link: https://doi.org/10.1016/..
 
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5

AlphaFold predicts novel human proteins with knots:

Perlinska, Agata P. ; Niemyska, Wanda H. ; Gren, Bartosz A....
Protein Science.  32 (2023)  5 - p. , 2023
Link: https://doi.org/10.1002/..
 
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6

Conservation of knotted and slipknotted topology in transme..:

Zayats, Vasilina ; Sikora, Maciej ; Perlinska, Agata P....
Biophysical Journal.  122 (2023)  23 - p. 4528-4541 , 2023
Link: https://doi.org/10.1016/..
 
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7

Amino acid variants of SARS-CoV-2 papain-like protease have..:

Perlinska, Agata P. ; Stasiulewicz, Adam ; Nguyen, Mai Lan...
PLOS Computational Biology.  18 (2022)  11 - p. e1010667 , 2022
Link: https://doi.org/10.1371/..
 
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8

Slipknotted and unknotted monovalent cation-proton antiport..:

Zayats, Vasilina ; Perlinska, Agata P. ; Jarmolinska, Aleksandra I....
PLOS Computational Biology.  17 (2021)  10 - p. e1009502 , 2021
Link: https://doi.org/10.1371/..
 
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9

Mg2+-Dependent Methyl Transfer by a Knotted Protein: A Mole..:

Perlinska, Agata P. ; Kalek, Marcin ; Christian, Thomas..
ACS Catalysis.  10 (2020)  15 - p. 8058-8068 , 2020
Link: https://doi.org/10.1021/..
 
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10

Restriction of S-adenosylmethionine conformational freedom ..:

Perlinska, Agata P. ; Stasiulewicz, Adam ; Nawrocka, Ewa K....
PLOS Computational Biology.  16 (2020)  5 - p. e1007904 , 2020
Link: https://doi.org/10.1371/..
 
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11

Proteins' Knotty Problems:

Jarmolinska, Aleksandra I. ; Perlinska, Agata P. ; Runkel, Robert...
Journal of Molecular Biology.  431 (2019)  2 - p. 244-257 , 2019
Link: https://doi.org/10.1016/..
 
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12

Nucleolar Essential Protein 1 (Nep1): Elucidation of enzyma..:

Mateusz Jedrzejewski ; Barbara Belza ; Iwona Lewandowska...
http://www.sciencedirect.com/science/article/pii/S2001037023002763.  , 2023
Link: https://doi.org/10.1016/..
 
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13

Slipknotted and unknotted monovalent cation-proton antiport..:

Vasilina Zayats ; Agata P Perlinska ; Aleksandra I Jarmolinska...
https://doi.org/10.1371/journal.pcbi.1009502.  , 2021
Link: https://doi.org/10.1371/..
 
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14

Restriction of S-adenosylmethionine conformational freedom ..:

Agata P Perlinska ; Adam Stasiulewicz ; Ewa K Nawrocka...
https://doi.org/10.1371/journal.pcbi.1007904.  , 2020
Link: https://doi.org/10.1371/..
 
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15

MOLECULAR DYNAMICS AND STRUCTURAL COMPARISON APPROACH TO UN..:

AGATA P. PERLINSKA ; JOANNA M. MACNAR ; JOANNA I. SULKOWSKA
https://journal.mostwiedzy.pl/TASKQuarterly/article/view/1827.  , 2016
Link: https://doi.org/10.17466..
 
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