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Imprecise recombinant viruses evolve via a fitness-driven, ..:
Bentley, Kirsten ; Alnaji, Fadi Ghassan ; Woodford, Luke...
PLOS Pathogens. 17 (2021) 8 - p. e1009676 , 2021
PLOS Pathogens. 17 (2021) 8 - p. e1009676 , 2021
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2
Imprecise recombinant viruses evolve via a fitness-driven, ..:
Bentley, Kirsten ; Alnaji, Fadi Ghassan ; Woodford, Luke...
Bentley , K , Alnaji , F G , Woodford , L , Jones , S , Woodman , A & Evans , D J 2021 , ' Imprecise recombinant viruses evolve via a fitness-driven, iterative process of polymerase template-switching events ' , PLoS Pathogens , vol. 17 , no. 8 , e1009676 . https://doi.org/10.1371/journal.ppat.1009676. , 2021
Bentley , K , Alnaji , F G , Woodford , L , Jones , S , Woodman , A & Evans , D J 2021 , ' Imprecise recombinant viruses evolve via a fitness-driven, iterative process of polymerase template-switching events ' , PLoS Pathogens , vol. 17 , no. 8 , e1009676 . https://doi.org/10.1371/journal.ppat.1009676. , 2021
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3
Imprecise recombinant viruses evolve via a fitness-driven, ..:
Kirsten Bentley ; Fadi Ghassan Alnaji ; Luke Woodford...
https://doi.org/10.1371/journal.ppat.1009676. , 2021
https://doi.org/10.1371/journal.ppat.1009676. , 2021
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4
The rate of resolution of #105B increases in the presence o..:
Kirsten Bentley (426888) ; Fadi Ghassan Alnaji (11307931) ; Luke Woodford (576538)...
https://figshare.com/articles/figure/The_rate_of_resolution_of_105B_increases_in_the_presence_of_Ribavirin_/15834202. , 2021
https://figshare.com/articles/figure/The_rate_of_resolution_of_105B_increases_in_the_presence_of_Ribavirin_/15834202. , 2021
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5
#105B variant population frequencies:
Kirsten Bentley (426888) ; Fadi Ghassan Alnaji (11307931) ; Luke Woodford (576538)...
https://figshare.com/articles/figure/_105B_variant_population_frequencies_/15834163. , 2021
https://figshare.com/articles/figure/_105B_variant_population_frequencies_/15834163. , 2021
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6
Analysis of barcoded #105B recombinants:
Kirsten Bentley (426888) ; Fadi Ghassan Alnaji (11307931) ; Luke Woodford (576538)...
https://figshare.com/articles/figure/Analysis_of_barcoded_105B_recombinants_/15834208. , 2021
https://figshare.com/articles/figure/Analysis_of_barcoded_105B_recombinants_/15834208. , 2021
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7
Phenotypic characterisation of intra- and intertypic imprec..:
Kirsten Bentley (426888) ; Fadi Ghassan Alnaji (11307931) ; Luke Woodford (576538)...
https://figshare.com/articles/figure/Phenotypic_characterisation_of_intra-_and_intertypic_imprecise_recombinants_/15834190. , 2021
https://figshare.com/articles/figure/Phenotypic_characterisation_of_intra-_and_intertypic_imprecise_recombinants_/15834190. , 2021
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8
Comparison of recombinants identified between #105B nanopor..:
Kirsten Bentley (426888) ; Fadi Ghassan Alnaji (11307931) ; Luke Woodford (576538)...
https://figshare.com/articles/figure/Comparison_of_recombinants_identified_between_105B_nanopore_replicates_/15834196. , 2021
https://figshare.com/articles/figure/Comparison_of_recombinants_identified_between_105B_nanopore_replicates_/15834196. , 2021
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9
Shannon entropy diversity of Illumina sequenced resolving #..:
Kirsten Bentley (426888) ; Fadi Ghassan Alnaji (11307931) ; Luke Woodford (576538)...
https://figshare.com/articles/figure/Shannon_entropy_diversity_of_Illumina_sequenced_resolving_105B_populations_/15834169. , 2021
https://figshare.com/articles/figure/Shannon_entropy_diversity_of_Illumina_sequenced_resolving_105B_populations_/15834169. , 2021
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10
Oxford Nanopore Technologies sequencing analysis pipeline:
Kirsten Bentley (426888) ; Fadi Ghassan Alnaji (11307931) ; Luke Woodford (576538)...
https://figshare.com/articles/figure/Oxford_Nanopore_Technologies_sequencing_analysis_pipeline_/15834157. , 2021
https://figshare.com/articles/figure/Oxford_Nanopore_Technologies_sequencing_analysis_pipeline_/15834157. , 2021
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11
Oxford Nanopore Technologies Library and Reads:
Kirsten Bentley (426888) ; Fadi Ghassan Alnaji (11307931) ; Luke Woodford (576538)...
https://figshare.com/articles/journal_contribution/Oxford_Nanopore_Technologies_Library_and_Reads_/15834175. , 2021
https://figshare.com/articles/journal_contribution/Oxford_Nanopore_Technologies_Library_and_Reads_/15834175. , 2021
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12
Model of recombination and resolution:
Kirsten Bentley (426888) ; Fadi Ghassan Alnaji (11307931) ; Luke Woodford (576538)...
https://figshare.com/articles/figure/Model_of_recombination_and_resolution_/15834187. , 2021
https://figshare.com/articles/figure/Model_of_recombination_and_resolution_/15834187. , 2021
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13
Sequences of recombinant junctions identified from nanopore..:
Kirsten Bentley (426888) ; Fadi Ghassan Alnaji (11307931) ; Luke Woodford (576538)...
https://figshare.com/articles/figure/Sequences_of_recombinant_junctions_identified_from_nanopore_analysis_/15834160. , 2021
https://figshare.com/articles/figure/Sequences_of_recombinant_junctions_identified_from_nanopore_analysis_/15834160. , 2021
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14
Visualisation of #105B Illumina recombinant type:
Kirsten Bentley (426888) ; Fadi Ghassan Alnaji (11307931) ; Luke Woodford (576538)...
https://figshare.com/articles/figure/Visualisation_of_105B_Illumina_recombinant_type_/15834199. , 2021
https://figshare.com/articles/figure/Visualisation_of_105B_Illumina_recombinant_type_/15834199. , 2021
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15
Barcoded #105B Variants:
Kirsten Bentley (426888) ; Fadi Ghassan Alnaji (11307931) ; Luke Woodford (576538)...
https://figshare.com/articles/journal_contribution/Barcoded_105B_Variants_/15834181. , 2021
https://figshare.com/articles/journal_contribution/Barcoded_105B_Variants_/15834181. , 2021