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Aponte-Serrano, Josua O.
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1

Multicellular spatial model of RNA virus replication and in..:

Aponte-Serrano, Josua O. ; Weaver, Jordan J. A. ; Sego, T. J....
PLOS Computational Biology.  17 (2021)  10 - p. e1008874 , 2021
Link: https://doi.org/10.1371/..
 
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2

Generation of multicellular spatiotemporal models of popula..:

Sego, T. J. ; Aponte-Serrano, Josua O. ; Gianlupi, Juliano F..
BMC Biology.  19 (2021)  1 - p. , 2021
Link: https://doi.org/10.1186/..
 
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3

A modular framework for multiscale, multicellular, spatiote..:

Sego, T. J. ; Aponte-Serrano, Josua O. ; Ferrari Gianlupi, Juliano...
PLOS Computational Biology.  16 (2020)  12 - p. e1008451 , 2020
Link: https://doi.org/10.1371/..
 
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4

Generation of multicellular spatiotemporal models of popula..:

Sego, T. J ; Aponte-Serrano, Josua O ; Gianlupi, Juliano F.
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC8424622/.  , 2021
Link: http://www.ncbi.nlm.nih...
 
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5

A modular framework for multiscale multicellular spatial mo..:

Sego, T.J ; Aponte-Serrano, Josua O ; Gianlupi, Juliano Ferrari...
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC7263495/.  , 2020
Link: http://www.ncbi.nlm.nih...
 
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6

Fig 6D with all outliers visible:

Josua O. Aponte-Serrano (9904912) ; Jordan J. A. Weaver (11604319) ; T. J. Sego (9904909)..
https://figshare.com/articles/figure/Fig_6D_with_all_outliers_visible_/16868947.  , 2021
Link: https://doi.org/10.1371/..
 
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7

Elevated IFN diffusion coefficient ( D IFNe ) leads to plaq..:

Josua O. Aponte-Serrano (9904912) ; Jordan J. A. Weaver (11604319) ; T. J. Sego (9904909)..
https://figshare.com/articles/figure/Elevated_IFN_diffusion_coefficient_DIFNe_leads_to_plaque_arrest_/16868971.  , 2021
Link: https://doi.org/10.1371/..
 
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8

Increased RIG-I activity ( k IFN , V(RIGI) ) lowers plaque ..:

Josua O. Aponte-Serrano (9904912) ; Jordan J. A. Weaver (11604319) ; T. J. Sego (9904909)..
https://figshare.com/articles/figure/Increased_RIG-I_activity_i_k_i_sub_i_IFN_i_i_V_RIGI_i_sub_lowers_plaque_growth_rates_and_viral_titers_slows_cell_death_and_increases_interferon_production_/16869001.  , 2021
Link: https://doi.org/10.1371/..
 
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9

Local sensitivity analysis with elevated paracrine signalin:

Josua O. Aponte-Serrano (9904912) ; Jordan J. A. Weaver (11604319) ; T. J. Sego (9904909)..
https://figshare.com/articles/figure/Local_sensitivity_analysis_with_elevated_paracrine_signaling_/16868956.  , 2021
Link: https://doi.org/10.1371/..
 
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10

Plaque growth simulations replicate experimentally observed..:

Josua O. Aponte-Serrano (9904912) ; Jordan J. A. Weaver (11604319) ; T. J. Sego (9904909)..
https://figshare.com/articles/figure/Plaque_growth_simulations_replicate_experimentally_observed_linear_radial_plaque_growth_/16868995.  , 2021
Link: https://doi.org/10.1371/..
 
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11

Local single-factor sensitivity analysis for three simulati..:

Josua O. Aponte-Serrano (9904912) ; Jordan J. A. Weaver (11604319) ; T. J. Sego (9904909)..
https://figshare.com/articles/figure/Local_single-factor_sensitivity_analysis_for_three_simulation_regimes_/16869010.  , 2021
Link: https://doi.org/10.1371/..
 
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12

Comparison of an experimental plaque assay for influenza (H..:

Josua O. Aponte-Serrano (9904912) ; Jordan J. A. Weaver (11604319) ; T. J. Sego (9904909)..
https://figshare.com/articles/figure/Comparison_of_an_experimental_plaque_assay_for_influenza_H5N1_left_with_an_MSIS_model_plaque_simulation_for_H1N1_right_/16868992.  , 2021
Link: https://doi.org/10.1371/..
 
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13

A parameter sweep of β (rate of transition from uninfected ..:

Josua O. Aponte-Serrano (9904912) ; Jordan J. A. Weaver (11604319) ; T. J. Sego (9904909)..
https://figshare.com/articles/figure/A_parameter_sweep_of_i_i_rate_of_transition_from_uninfected_U_to_eclipse_phase_I1_cells_from_0_01x_to_100x_baseline_reveals_steady_growth_increases_/16868965.  , 2021
Link: https://doi.org/10.1371/..
 
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14

Standard deviation and standard error of simulations versus..:

Josua O. Aponte-Serrano (9904912) ; Jordan J. A. Weaver (11604319) ; T. J. Sego (9904909)..
https://figshare.com/articles/figure/Standard_deviation_and_standard_error_of_simulations_versus_replicas_for_the_baseline_Table_2_/16868941.  , 2021
Link: https://doi.org/10.1371/..
 
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15

Dependence of plaque growth rate and arrest on viral and IF..:

Josua O. Aponte-Serrano (9904912) ; Jordan J. A. Weaver (11604319) ; T. J. Sego (9904909)..
https://figshare.com/articles/figure/Dependence_of_plaque_growth_rate_and_arrest_on_viral_and_IFN_diffusion_coefficients_/16869007.  , 2021
Link: https://doi.org/10.1371/..
 
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