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Ay, Ferhat
196
results:
Search for persons
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Format
Online (196)
Mediatypes
Articles (Online) (91)
Bookchapter (Online) (2)
OpenAccess-fulltext (103)
Languages
english (158)
Sorted by: Relevance
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1
Pairtools: From sequencing data to chromosome contacts:
Open2C
;
Abdennur, Nezar
;
Fudenberg, Geoffrey
...
PLOS Computational Biology. 20 (2024) 5 - p. e1012164 , 2024
Link:
https://doi.org/10.1371/..
?
2
LIGHT signaling through LTβR and HVEM in keratinocytes prom..:
Gupta, Rinkesh K.
;
Figueroa, Daniela Salgado
;
Fung, Kai
...
Journal of Autoimmunity. 144 (2024) - p. 103177 , 2024
Link:
https://doi.org/10.1016/..
?
3
A multi-omics systems vaccinology resource to develop and t..:
Shinde, Pramod
;
Soldevila, Ferran
;
Reyna, Joaquin
...
Cell Reports Methods. 4 (2024) 3 - p. 100731 , 2024
Link:
https://doi.org/10.1016/..
?
4
Predicting gene expression state and prioritizing putative ..:
Gonzalez-Avalos, Edahi
;
Onodera, Atsushi
;
Samaniego-Castruita, Daniela
..
Genome Biology. 25 (2024) 1 - p. , 2024
Link:
https://doi.org/10.1186/..
?
5
Atypical B cells consist of subsets with distinct functiona..:
Reyes, Raphael A.
;
Batugedara, Gayani
;
Dutta, Paramita
...
iScience. 26 (2023) 12 - p. 108496 , 2023
Link:
https://doi.org/10.1016/..
?
6
DeepChIA-PET: Accurately predicting ChIA-PET from Hi-C and ..:
Liu, Tong
;
Wang, Zheng
;
Ay, Ferhat
PLOS Computational Biology. 19 (2023) 7 - p. e1011307 , 2023
Link:
https://doi.org/10.1371/..
?
7
Publisher Correction: Rewiring of the 3D genome during acqu..:
Dozmorov, Mikhail G.
;
Marshall, Maggie A.
;
Rashid, Narmeen S.
...
Scientific Reports. 13 (2023) 1 - p. , 2023
Link:
https://doi.org/10.1038/..
?
8
Mapping the semi-nested community structure of 3D chromosom..:
Bernenko, Dolores
;
Lee, Sang Hoon
;
Stenberg, Per
..
PLOS Computational Biology. 19 (2023) 7 - p. e1011185 , 2023
Link:
https://doi.org/10.1371/..
?
9
Rewiring of the 3D genome during acquisition of carboplatin..:
Dozmorov, Mikhail G.
;
Marshall, Maggie A.
;
Rashid, Narmeen S.
...
Scientific Reports. 13 (2023) 1 - p. , 2023
Link:
https://doi.org/10.1038/..
?
10
Lymphotoxin beta receptor signaling directly controls airwa..:
Miki, Haruka
;
Kiosses, William B.
;
Manresa, Mario C.
...
Journal of Allergy and Clinical Immunology. 151 (2023) 4 - p. 976-990.e5 , 2023
Link:
https://doi.org/10.1016/..
?
11
Lineage-specific 3D genome organization is assembled at mul..:
Hu, Yeguang
;
Salgado Figueroa, Daniela
;
Zhang, Zhihong
...
Cell. 186 (2023) 24 - p. 5269-5289.e22 , 2023
Link:
https://doi.org/10.1016/..
?
12
MuDCoD: multi-subject community detection in personalized d..:
Şapcı, Ali Osman Berk
;
Lu, Shan
;
Yan, Shuchen
...
Bioinformatics. 39 (2023) 10 - p. , 2023
Link:
https://doi.org/10.1093/..
?
13
Construction of disease-specific cytokine profiles by assoc..:
Liu, Tianyun
;
Wang, Shiyin
;
Wornow, Michael
..
PLOS Computational Biology. 18 (2022) 4 - p. e1009497 , 2022
Link:
https://doi.org/10.1371/..
?
14
WhichTF is functionally important in your open chromatin da..:
Tanigawa, Yosuke
;
Dyer, Ethan S.
;
Bejerano, Gill
.
PLOS Computational Biology. 18 (2022) 8 - p. e1010378 , 2022
Link:
https://doi.org/10.1371/..
?
15
Dynamical modeling of the H3K27 epigenetic landscape in mou..:
Newar, Kapil
;
Abdulla, Amith Zafal
;
Salari, Hossein
...
PLOS Computational Biology. 18 (2022) 9 - p. e1010450 , 2022
Link:
https://doi.org/10.1371/..
1-15