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Basu, Shubham
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1

Clinical Validation of a Targeted Next-Generation Sequencin..:

Artymiuk, Cody J. ; Basu, Shubham ; Koganti, Tejaswi...
The Journal of Molecular Diagnostics.  26 (2024)  7 - p. 583-598 , 2024
Link: https://doi.org/10.1016/..
 
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2

Variant Detection in 3′ Exons of PMS2 Using Exome Sequencin..:

Mistry, Nipun A. ; Roellinger, Samantha E. ; Manninen, Matthew C....
The Journal of Molecular Diagnostics.  , 2024
Link: https://doi.org/10.1016/..
 
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3

MICon Contamination Detection Workflow for Next-Generation ..:

Balan, Jagadheshwar ; Koganti, Tejaswi ; Basu, Shubham...
The Journal of Molecular Diagnostics.  25 (2023)  8 - p. 602-610 , 2023
Link: https://doi.org/10.1016/..
 
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4

30. A cost-effective bioinformatics triage strategy for tes..:

Shen, Wei ; Koganti, Tejaswi ; Balan, Jagadheshwar...
Cancer Genetics.  260-261 (2022)  - p. 10-11 , 2022
Link: https://doi.org/10.1016/..
 
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5

Comparison of TCF4 repeat expansion length in corneal endot..:

Wieben, Eric D. ; Aleff, Ross A. ; Rinkoski, Tommy A....
PLOS ONE.  16 (2021)  12 - p. e0260837 , 2021
Link: https://doi.org/10.1371/..
 
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6

LeafCutterMD: an algorithm for outlier splicing detection i..:

Jenkinson, Garrett ; Li, Yang I ; Basu, Shubham...
Bioinformatics.  36 (2020)  17 - p. 4609-4615 , 2020
Link: https://doi.org/10.1093/..
 
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7

Amplification-free long-read sequencing of TCF4 expanded tr..:

Wieben, Eric D. ; Aleff, Ross A. ; Basu, Shubham...
PLOS ONE.  14 (2019)  7 - p. e0219446 , 2019
Link: https://doi.org/10.1371/..
 
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8

A tailored approach to fusion transcript identification inc..:

Oliver, Gavin R. ; Tang, Xiaojia ; Schultz-Rogers, Laura E....
PLOS ONE.  14 (2019)  10 - p. e0223337 , 2019
Link: https://doi.org/10.1371/..
 
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9

An intragenic duplication of TRPS1 leading to abnormal tran..:

Zepeda-Mendoza, Cinthya J ; Cousin, Margot A ; Basu, Shubham...
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6913153/.  , 2019
Link: http://www.ncbi.nlm.nih...
 
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10

Comparison of TCF4 repeat expansion length in corneal endot..:

Eric D Wieben ; Ross A Aleff ; Tommy A Rinkoski...
https://doi.org/10.1371/journal.pone.0260837.  , 2021
Link: https://doi.org/10.1371/..
 
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11

A tailored approach to fusion transcript identification inc..:

Gavin R Oliver ; Xiaojia Tang ; Laura E Schultz-Rogers...
https://doi.org/10.1371/journal.pone.0223337.  , 2019
Link: https://doi.org/10.1371/..
 
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12

Amplification-free long-read sequencing of TCF4 expanded tr..:

Eric D Wieben ; Ross A Aleff ; Shubham Basu...
https://doi.org/10.1371/journal.pone.0219446.  , 2019
Link: https://doi.org/10.1371/..
 
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13

Southern blot of peripheral blood leukocyte and primary HCE..:

Eric D. Wieben (11502282) ; Ross A. Aleff (11785563) ; Tommy A. Rinkoski (8721036)...
https://figshare.com/articles/figure/Southern_blot_of_peripheral_blood_leukocyte_and_primary_HCEC_lines_established_from_control_and_FECD_patients_/17116737.  , 2021
Link: https://doi.org/10.1371/..
 
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14

Iso-Seq reads from the corneal endothelium include repeat e..:

Eric D. Wieben (11502282) ; Ross A. Aleff (11785563) ; Tommy A. Rinkoski (8721036)...
https://figshare.com/articles/figure/Iso-Seq_reads_from_the_corneal_endothelium_include_repeat_expansions_greater_than_6_kb_in_length_/17116728.  , 2021
Link: https://doi.org/10.1371/..
 
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15

S1 Raw images -:

Eric D. Wieben (11502282) ; Ross A. Aleff (11785563) ; Tommy A. Rinkoski (8721036)...
https://figshare.com/articles/journal_contribution/S1_Raw_images_-/17116722.  , 2021
Link: https://doi.org/10.1371/..
 
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