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Bittremieux, Wout
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1

DRAM-Based Acceleration of Open Modification Search in Hype..:

Kang, Jaeyoung ; Xu, Weihong ; Bittremieux, Wout..
IEEE Transactions on Computer-Aided Design of Integrated Circuits and Systems.  43 (2024)  9 - p. 2592-2605 , 2024
Link: https://doi.org/10.1109/..
 
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2

SpecHD: Hyperdimensional Computing Framework for FPGA-Based..:

, In: 2024 Design, Automation & Test in Europe Conference & Exhibition (DATE),
Pinge, Sumukh ; Xu, Weihong ; Kang, Jaeyoung... - p. 1-6 , 2024
Link: https://doi.org/10.23919..
 
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3

Accounting for Digestion Enzyme Bias in Casanovo:

Melendez, Carlo ; Sanders, Justin ; Yilmaz, Melih...
Journal of Proteome Research.  , 2024
Link: https://doi.org/10.1021/..
 
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4

Sequence-to-sequence translation from mass spectra to pepti..:

Yilmaz, Melih ; Fondrie, William E. ; Bittremieux, Wout...
Nature Communications.  15 (2024)  1 - p. , 2024
Link: https://doi.org/10.1038/..
 
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5

The underappreciated diversity of bile acid modifications:

Mohanty, Ipsita ; Mannochio-Russo, Helena ; Schweer, Joshua V....
Cell.  187 (2024)  7 - p. 1801-1818.e20 , 2024
Link: https://doi.org/10.1016/..
 
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6

Communicating Mass Spectrometry Quality Information in mzQC..:

Bielow, Chris ; Hoffmann, Nils ; Jimenez-Morales, David...
Journal of the American Society for Mass Spectrometry.  35 (2024)  8 - p. 1875-1882 , 2024
Link: https://doi.org/10.1021/..
 
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7

From data to discovery: The essential role of computational..:

Bittremieux, Wout
PROTEOMICS.  24 (2024)  8 - p. , 2024
Link: https://doi.org/10.1002/..
 
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8

Semisupervised Learning to Boost hERG, Nav1.5, and Cav1.2 C..:

Arab, Issar ; Laukens, Kris ; Bittremieux, Wout
Journal of Chemical Information and Modeling.  64 (2024)  16 - p. 6410-6420 , 2024
Link: https://doi.org/10.1021/..
 
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9

Machine Learning Strategies to Tackle Data Challenges in Ma..:

Dens, Ceder ; Adams, Charlotte ; Laukens, Kris.
Journal of the American Society for Mass Spectrometry.  35 (2024)  9 - p. 2143-2155 , 2024
Link: https://doi.org/10.1021/..
 
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10

Fragment ion intensity prediction improves the identificati..:

Adams, Charlotte ; Gabriel, Wassim ; Laukens, Kris...
Nature Communications.  15 (2024)  1 - p. , 2024
Link: https://doi.org/10.1038/..
 
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11

Bidirectional de novo peptide sequencing using a transforme..:

Lee, Sangjeong ; Kim, Hyunwoo ; Bittremieux, Wout
PLOS Computational Biology.  20 (2024)  2 - p. e1011892 , 2024
Link: https://doi.org/10.1371/..
 
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12

Accelerating open modification spectral library searching o..:

Kang, Jaeyoung ; Xu, Weihong ; Bittremieux, Wout...
Bioinformatics.  39 (2023)  7 - p. , 2023
Link: https://doi.org/10.1093/..
 
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13

Open access repository-scale propagated nearest neighbor su..:

Bittremieux, Wout ; Avalon, Nicole E. ; Thomas, Sydney P....
Nature Communications.  14 (2023)  1 - p. , 2023
Link: https://doi.org/10.1038/..
 
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14

HyperSpec: Ultrafast Mass Spectra Clustering in Hyperdimens..:

Xu, Weihong ; Kang, Jaeyoung ; Bittremieux, Wout..
Journal of Proteome Research.  22 (2023)  6 - p. 1639-1648 , 2023
Link: https://doi.org/10.1021/..
 
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15

Unified and Standardized Mass Spectrometry Data Processing ..:

Bittremieux, Wout ; Levitsky, Lev ; Pilz, Matteo...
Journal of Proteome Research.  22 (2023)  2 - p. 625-631 , 2023
Link: https://doi.org/10.1021/..
 
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