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Brejová, Broňa
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1

Chromosome-level genome assembly of the yeast Lodderomyces ..:

Brejová, Broňa ; Hodorová, Viktória ; Mutalová, Sofia...
DNA Research.  31 (2024)  3 - p. , 2024
Link: https://doi.org/10.1093/..
 
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2

Chromosome-level genome assembly of an auxotrophic strain o..:

Mutalová, Sofia ; Hodorová, Viktória ; Brázdovič, Filip...
Microbiology Resource Announcements.  , 2024
Link: https://doi.org/10.1128/..
 
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3

Efficient Analysis of Annotation Colocalization Accounting ..:

, In: Lecture Notes in Computer Science; Research in Computational Molecular Biology,
Gafurov, Askar ; Vinař, Tomáš ; Medvedev, Paul. - p. 38-53 , 2024
Link: https://doi.org/10.1007/..
 
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4

Reduction of ribosomal expansion segments in yeast species ..:

Brázdovič, Filip ; Brejová, Broňa ; Siváková, Barbara...
Genome Biology and Evolution.  , 2024
Link: https://doi.org/10.1093/..
 
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5

Maximum-scoring path sets on pangenome graphs of constant t..:

Brejová, Broňa ; Gagie, Travis ; Herencsárová, Eva.
Frontiers in Bioinformatics.  4 (2024)  - p. , 2024
Link: https://doi.org/10.3389/..
 
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6

Chromosome-Level Genome Assembly of the Yeast Candida verba..:

Brejová, Broňa ; Hodorová, Viktória ; Lichancová, Hana...
Microbiology Resource Announcements.  12 (2023)  3 - p. , 2023
Link: https://doi.org/10.1128/..
 
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7

WarpSTR: determining tandem repeat lengths using raw nanopo..:

Sitarčík, Jozef ; Vinař, Tomáš ; Brejová, Broňa...
Bioinformatics.  39 (2023)  6 - p. , 2023
Link: https://doi.org/10.1093/..
 
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8

plASgraph2: using graph neural networks to detect plasmid c..:

Sielemann, Janik ; Sielemann, Katharina ; Brejová, Broňa..
Frontiers in Microbiology.  14 (2023)  - p. , 2023
Link: https://doi.org/10.3389/..
 
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9

PlasBin-flow: a flow-based MILP algorithm for plasmid conti..:

Mane, Aniket ; Faizrahnemoon, Mahsa ; Vinař, Tomáš..
Bioinformatics.  39 (2023)  Supplement_1 - p. i288-i296 , 2023
Link: https://doi.org/10.1093/..
 
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10

Transcriptome and proteome profiling reveals complex adapta..:

Cillingová, Andrea ; Tóth, Renáta ; Mojáková, Anna...
PLOS Genetics.  18 (2022)  3 - p. e1009815 , 2022
Link: https://doi.org/10.1371/..
 
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11

Dynamic Pooling Improves Nanopore Base Calling Accuracy:

Boža, Vladimír ; Perešíni, Peter ; Brejová, Broňa.
IEEE/ACM Transactions on Computational Biology and Bioinformatics.  19 (2022)  6 - p. 3416-3424 , 2022
Link: https://doi.org/10.1109/..
 
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12

Markov chains improve the significance computation of overl..:

Gafurov, Askar ; Brejová, Broňa ; Medvedev, Paul
Bioinformatics.  38 (2022)  Supplement_1 - p. i203-i211 , 2022
Link: https://doi.org/10.1093/..
 
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13

VirPool: model-based estimation of SARS-CoV-2 variant propo..:

Gafurov, Askar ; Baláž, Andrej ; Amman, Fabian...
BMC Bioinformatics.  23 (2022)  1 - p. , 2022
Link: https://doi.org/10.1186/..
 
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14

Nanopore sequencing of SARS-CoV-2: Comparison of short and ..:

Brejová, Broňa ; Boršová, Kristína ; Hodorová, Viktória...
PLOS ONE.  16 (2021)  10 - p. e0259277 , 2021
Link: https://doi.org/10.1371/..
 
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15

Surveillance of SARS-CoV-2 lineage B.1.1.7 in Slovakia usin..:

Boršová, Kristína ; Paul, Evan D. ; Kováčová, Viera...
Scientific Reports.  11 (2021)  1 - p. , 2021
Link: https://doi.org/10.1038/..
 
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