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1
Ancestral haplotype reconstruction in endogamous population..:
Finke, Kelly ; Kourakos, Michael ; Brown, Gabriela...
PLOS Computational Biology. 17 (2021) 2 - p. e1008638 , 2021
PLOS Computational Biology. 17 (2021) 2 - p. e1008638 , 2021
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2
Ancestral haplotype reconstruction in endogamous population..:
Kelly Finke ; Michael Kourakos ; Gabriela Brown...
https://doi.org/10.1371/journal.pcbi.1008638. , 2021
https://doi.org/10.1371/journal.pcbi.1008638. , 2021
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3
Unsuccessful reconstruction examples:
Kelly Finke (10204631) ; Michael Kourakos (10204634) ; Gabriela Brown (10204637)...
https://figshare.com/articles/figure/Unsuccessful_reconstruction_examples_/14128016. , 2021
https://figshare.com/articles/figure/Unsuccessful_reconstruction_examples_/14128016. , 2021
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4
Leave-one-out results:
Kelly Finke (10204631) ; Michael Kourakos (10204634) ; Gabriela Brown (10204637)...
https://figshare.com/articles/dataset/Leave-one-out_results_/14128070. , 2021
https://figshare.com/articles/dataset/Leave-one-out_results_/14128070. , 2021
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5
Pedigree structure: 1338 individuals over 10 generations:
Kelly Finke (10204631) ; Michael Kourakos (10204634) ; Gabriela Brown (10204637)...
https://figshare.com/articles/figure/Pedigree_structure_1338_individuals_over_10_generations_/14128001. , 2021
https://figshare.com/articles/figure/Pedigree_structure_1338_individuals_over_10_generations_/14128001. , 2021
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6
Conflict resolution example:
Kelly Finke (10204631) ; Michael Kourakos (10204634) ; Gabriela Brown (10204637)...
https://figshare.com/articles/figure/Conflict_resolution_example_/14128058. , 2021
https://figshare.com/articles/figure/Conflict_resolution_example_/14128058. , 2021
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7
IBD length distribution:
Kelly Finke (10204631) ; Michael Kourakos (10204634) ; Gabriela Brown (10204637)...
https://figshare.com/articles/figure/IBD_length_distribution_/14128055. , 2021
https://figshare.com/articles/figure/IBD_length_distribution_/14128055. , 2021
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8
Nuclear family graph:
Kelly Finke (10204631) ; Michael Kourakos (10204634) ; Gabriela Brown (10204637)...
https://figshare.com/articles/figure/Nuclear_family_graph_/14128064. , 2021
https://figshare.com/articles/figure/Nuclear_family_graph_/14128064. , 2021
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9
Demonstration of removed segments in simulations:
Kelly Finke (10204631) ; Michael Kourakos (10204634) ; Gabriela Brown (10204637)...
https://figshare.com/articles/figure/Demonstration_of_removed_segments_in_simulations_/14128010. , 2021
https://figshare.com/articles/figure/Demonstration_of_removed_segments_in_simulations_/14128010. , 2021
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10
Example descendance paths:
Kelly Finke (10204631) ; Michael Kourakos (10204634) ; Gabriela Brown (10204637)...
https://figshare.com/articles/figure/Example_descendance_paths_/14128040. , 2021
https://figshare.com/articles/figure/Example_descendance_paths_/14128040. , 2021
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11
Position of reconstructed individuals in the pedigree:
Kelly Finke (10204631) ; Michael Kourakos (10204634) ; Gabriela Brown (10204637)...
https://figshare.com/articles/figure/Position_of_reconstructed_individuals_in_the_pedigree_/14128019. , 2021
https://figshare.com/articles/figure/Position_of_reconstructed_individuals_in_the_pedigree_/14128019. , 2021
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12
Example of the grouping algorithm on a genotyped individual:
Kelly Finke (10204631) ; Michael Kourakos (10204634) ; Gabriela Brown (10204637)...
https://figshare.com/articles/figure/Example_of_the_grouping_algorithm_on_a_genotyped_individual_/14128046. , 2021
https://figshare.com/articles/figure/Example_of_the_grouping_algorithm_on_a_genotyped_individual_/14128046. , 2021
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13
Inbreeding coefficients for each individual in the pedigree..:
Kelly Finke (10204631) ; Michael Kourakos (10204634) ; Gabriela Brown (10204637)...
https://figshare.com/articles/figure/Inbreeding_coefficients_for_each_individual_in_the_pedigree_structure_from_S1_Fig_/14128004. , 2021
https://figshare.com/articles/figure/Inbreeding_coefficients_for_each_individual_in_the_pedigree_structure_from_S1_Fig_/14128004. , 2021
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14
Genetic similarity vs. kinship:
Kelly Finke (10204631) ; Michael Kourakos (10204634) ; Gabriela Brown (10204637)...
https://figshare.com/articles/figure/Genetic_similarity_vs_kinship_/14128034. , 2021
https://figshare.com/articles/figure/Genetic_similarity_vs_kinship_/14128034. , 2021
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15
Individual results: Simulated data:
Kelly Finke (10204631) ; Michael Kourakos (10204634) ; Gabriela Brown (10204637)...
https://figshare.com/articles/figure/Individual_results_Simulated_data_/14128049. , 2021
https://figshare.com/articles/figure/Individual_results_Simulated_data_/14128049. , 2021