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Bruggeman, Frank J.
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1

Understanding and computational design of genetic circuits ..:

Berkvens, Alicia ; Salinas, Luis ; Remeijer, Maaike...
Essays in Biochemistry.  68 (2024)  1 - p. 41-51 , 2024
Link: https://doi.org/10.1042/..
 
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2

Trade‐offs between the instantaneous growth rate and long‐t..:

Bruggeman, Frank J. ; Teusink, Bas ; Steuer, Ralf
BioEssays.  45 (2023)  10 - p. , 2023
Link: https://doi.org/10.1002/..
 
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3

Is distance from equilibrium a good indicator for a reactio..:

van Niekerk, David D. ; Rust, Erik ; Bruggeman, Frank..
Biosystems.  232 (2023)  - p. 104988 , 2023
Link: https://doi.org/10.1016/..
 
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4

Whole-cell metabolic control analysis:

Bruggeman, Frank J. ; Remeijer, Maaike ; Droste, Maarten...
Biosystems.  234 (2023)  - p. 105067 , 2023
Link: https://doi.org/10.1016/..
 
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5

Understanding spatiotemporal coupling of gene expression us..:

Gerber, Alan ; van Otterdijk, Sander ; Bruggeman, Frank J..
Transcription.  14 (2023)  3-5 - p. 105-126 , 2023
Link: https://doi.org/10.1080/..
 
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6

Effective bet-hedging through growth rate dependent stabili..:

de Groot, Daan H. ; Tjalma, Age J. ; Bruggeman, Frank J..
Proceedings of the National Academy of Sciences.  120 (2023)  8 - p. , 2023
Link: https://doi.org/10.1073/..
 
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7

Single-cell imaging of ERK and Akt activation dynamics and ..:

Chavez-Abiega, Sergei ; Grönloh, Max L. B. ; Gadella Jr, Theodorus W. J...
Journal of Cell Science.  135 (2022)  6 - p. , 2022
Link: https://doi.org/10.1242/..
 
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8

Whole-cell modeling in yeast predicts compartment-specific ..:

Elsemman, Ibrahim E. ; Rodriguez Prado, Angelica ; Grigaitis, Pranas...
Nature Communications.  13 (2022)  1 - p. , 2022
Link: https://doi.org/10.1038/..
 
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9

Escherichia coli robustly expresses ATP synthase at growth ..:

Rabbers, Iraes ; Bruggeman, Frank J.
The FEBS Journal.  289 (2022)  16 - p. 4925-4934 , 2022
Link: https://doi.org/10.1111/..
 
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10

Selection for Cell Yield Does Not Reduce Overflow Metabolis..:

Rabbers, Iraes ; Gottstein, Willi ; Feist, Adam M...
Molecular Biology and Evolution.  39 (2021)  1 - p. , 2021
Link: https://doi.org/10.1093/..
 
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11

Unlocking Elementary Conversion Modes: ecmtool Unveils All ..:

Clement, Tom J. ; Baalhuis, Erik B. ; Teusink, Bas...
Patterns.  2 (2021)  1 - p. 100177 , 2021
Link: https://doi.org/10.1016/..
 
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12

The omnistat: A flexible continuous‐culture system for prol..:

Ekkers, David M. ; Branco dos Santos, Filipe ; Mallon, Cyrus A....
Methods in Ecology and Evolution.  11 (2020)  8 - p. 932-942 , 2020
Link: https://doi.org/10.1111/..
 
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13

The Fundamental Equations of Change in Statistical Ensemble..:

Frank, Steven A. ; Bruggeman, Frank J.
Entropy.  22 (2020)  12 - p. 1395 , 2020
Link: https://doi.org/10.3390/..
 
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14

Elementary Growth Modes provide a molecular description of ..:

de Groot, Daan H. ; Hulshof, Josephus ; Teusink, Bas...
PLOS Computational Biology.  16 (2020)  1 - p. e1007559 , 2020
Link: https://doi.org/10.1371/..
 
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15

Searching for principles of microbial physiology:

Bruggeman, Frank J ; Planqué, Robert ; Molenaar, Douwe.
FEMS Microbiology Reviews.  44 (2020)  6 - p. 821-844 , 2020
Link: https://doi.org/10.1093/..
 
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