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Cao, Siqin
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1

Tutorial on how to build non-Markovian dynamic models from ..:

Wu, Yue ; Cao, Siqin ; Qiu, Yunrui.
The Journal of Chemical Physics.  160 (2024)  12 - p. , 2024
Link: https://doi.org/10.1063/..
 
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2

Submillisecond Atomistic Molecular Dynamics Simulations Rev..:

Unarta, Ilona C. ; Cao, Siqin ; Goonetilleke, Eshani C....
The Journal of Physical Chemistry B.  128 (2024)  10 - p. 2347-2359 , 2024
Link: https://doi.org/10.1021/..
 
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3

Kinetic network models to elucidate aggregation dynamics of..:

Liu, Zige ; Kalin, Michael L. ; Liu, Bojun..
Aggregate.  5 (2023)  1 - p. , 2023
Link: https://doi.org/10.1002/..
 
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4

Integrative generalized master equation: A method to study ..:

Cao, Siqin ; Qiu, Yunrui ; Kalin, Michael L..
The Journal of Chemical Physics.  159 (2023)  13 - p. , 2023
Link: https://doi.org/10.1063/..
 
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5

Building insightful, memory-enriched models to capture long..:

Dominic III, Anthony J. ; Sayer, Thomas ; Cao, Siqin...
Proceedings of the National Academy of Sciences.  120 (2023)  12 - p. , 2023
Link: https://doi.org/10.1073/..
 
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6

Quasi Markov state models elucidates the role of bacterial ..:

Unarta, Ilona C. ; Cao, Siqin ; Huang, Xuhui
Biophysical Journal.  122 (2023)  3 - p. 445a , 2023
Link: https://doi.org/10.1016/..
 
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7

EPISOL: A software package with expanded functions to perfo..:

Cao, Siqin ; Kalin, Michael L. ; Huang, Xuhui
Journal of Computational Chemistry.  44 (2023)  17 - p. 1536-1549 , 2023
Link: https://doi.org/10.1002/..
 
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8

Memory Unlocks the Future of Biomolecular Dynamics: Transfo..:

Dominic III, Anthony J. ; Cao, Siqin ; Montoya-Castillo, Andrés.
Journal of the American Chemical Society.  145 (2023)  18 - p. 9916-9927 , 2023
Link: https://doi.org/10.1021/..
 
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9

The Ion-Dipole Correction of the 3DRISM Solvation Model to ..:

Cao, Siqin ; Qiu, Yunrui ; Unarta, Ilona C...
The Journal of Physical Chemistry B.  126 (2022)  43 - p. 8632-8645 , 2022
Link: https://doi.org/10.1021/..
 
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10

Elucidation of the key role of Pt···Pt interactions in the ..:

Zheng, Xiaoyan ; Chan, Michael Ho-Yeung ; Chan, Alan Kwun-Wa...
Proceedings of the National Academy of Sciences.  119 (2022)  12 - p. , 2022
Link: https://doi.org/10.1073/..
 
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11

RPnet: a reverse-projection-based neural network for coarse..:

Gu, Hanlin ; Wang, Wei ; Cao, Siqin...
Physical Chemistry Chemical Physics.  24 (2022)  3 - p. 1462-1474 , 2022
Link: https://doi.org/10.1039/..
 
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12

Role of bacterial RNA polymerase gate opening dynamics in D..:

Unarta, Ilona Christy ; Cao, Siqin ; Kubo, Shintaroh...
Proceedings of the National Academy of Sciences.  118 (2021)  17 - p. , 2021
Link: https://doi.org/10.1073/..
 
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13

Markov State Models to Study the Functional Dynamics of Pro..:

Konovalov, Kirill A. ; Unarta, Ilona Christy ; Cao, Siqin..
JACS Au.  1 (2021)  9 - p. 1330-1341 , 2021
Link: https://doi.org/10.1021/..
 
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14

Entropy of stapled peptide inhibitors in free state is the ..:

Unarta, Ilona Christy ; Xu, Jianchao ; Shang, Yuan...
RSC Chemical Biology.  2 (2021)  4 - p. 1274-1284 , 2021
Link: https://doi.org/10.1039/..
 
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15

Critical role of backbone coordination in the mRNA recognit..:

Zhu, Lizhe ; Jiang, Hanlun ; Cao, Siqin...
Communications Biology.  4 (2021)  1 - p. , 2021
Link: https://doi.org/10.1038/..
 
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