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Cope, Alexander L
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1

Examining the Effects of Temperature on the Evolution of Ba..:

Jain, Vatsal ; Cope, Alexander L ; Qian, Wenfeng
Genome Biology and Evolution.  16 (2024)  6 - p. , 2024
Link: https://doi.org/10.1093/..
 
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2

Re-examining Correlations Between Synonymous Codon Usage an..:

Akeju, Opetunde J ; Cope, Alexander L ; Hurst, Laurence
Genome Biology and Evolution.  16 (2024)  5 - p. , 2024
Link: https://doi.org/10.1093/..
 
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3

On the Decoupling of Evolutionary Changes in mRNA and Prote..:

Jiang, Daohan ; Cope, Alexander L ; Zhang, Jianzhi..
Molecular Biology and Evolution.  40 (2023)  8 - p. , 2023
Link: https://doi.org/10.1093/..
 
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4

riboviz 2: a flexible and robust ribosome profiling data an..:

Cope, Alexander L ; Anderson, Felicity ; Favate, John...
Bioinformatics.  38 (2022)  8 - p. 2358-2360 , 2022
Link: https://doi.org/10.1093/..
 
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5

Intragenomic variation in non-adaptive nucleotide biases ca..:

Cope, Alexander L. ; Shah, Premal ; Fay, Justin C.
PLOS Genetics.  18 (2022)  6 - p. e1010256 , 2022
Link: https://doi.org/10.1371/..
 
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6

Quantifying shifts in natural selection on codon usage betw..:

Cope, Alexander L. ; Gilchrist, Michael A.
BMC Genomics.  23 (2022)  1 - p. , 2022
Link: https://doi.org/10.1186/..
 
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7

Isolation, profiling, and tracking of extracellular vesicle..:

Nikonorova, Inna A. ; Wang, Juan ; Cope, Alexander L....
Current Biology.  32 (2022)  9 - p. 1924-1936.e6 , 2022
Link: https://doi.org/10.1016/..
 
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8

The landscape of transcriptional and translational changes ..:

Favate, John S ; Liang, Shun ; Cope, Alexander L..
eLife.  11 (2022)  - p. , 2022
Link: https://doi.org/10.7554/..
 
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9

Identification and characterization of proteins of unknown ..:

Poudel, Suresh ; Cope, Alexander L. ; O'Dell, Kaela B....
Biotechnology for Biofuels.  14 (2021)  1 - p. , 2021
Link: https://doi.org/10.1186/..
 
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10

Promoter-sequence determinants and structural basis of prim..:

Skalenko, Kyle S. ; Li, Lingting ; Zhang, Yuanchao...
Proceedings of the National Academy of Sciences.  118 (2021)  27 - p. , 2021
Link: https://doi.org/10.1073/..
 
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11

Gene expression of functionally-related genes coevolves acr..:

Cope, Alexander L. ; O'Meara, Brian C. ; Gilchrist, Michael A.
BMC Genomics.  21 (2020)  1 - p. , 2020
Link: https://doi.org/10.1186/..
 
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12

Integrating Brain and Biomechanical Models—A New Paradigm f..:

James, Sebastian S. ; Papapavlou, Chris ; Blenkinsop, Alexander...
Frontiers in Neuroscience.  12 (2018)  - p. , 2018
Link: https://doi.org/10.3389/..
 
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13

Quantifying codon usage in signal peptides: Gene expression..:

Cope, Alexander L. ; Hettich, Robert L. ; Gilchrist, Michael A.
Biochimica et Biophysica Acta (BBA) - Biomembranes.  1860 (2018)  12 - p. 2479-2485 , 2018
Link: https://doi.org/10.1016/..
 
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14

The SpineML toolchain: enabling computational neuroscience ..:

Cope, Alexander J ; Richmond, Paul ; Allerton, Dave
BMC Neuroscience.  15 (2014)  S1 - p. , 2014
Link: https://doi.org/10.1186/..
 
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15

SpineML and Brian 2.0 interfaces for using GPU enhanced Neu..:

Nowotny, Thomas ; Cope, Alexander J ; Yavuz, Esin...
BMC Neuroscience.  15 (2014)  S1 - p. , 2014
Link: https://doi.org/10.1186/..
 
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