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Dąbrowski-Tumański, Paweł
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1

AlphaFold Blindness to Topological Barriers Affects Its Abi..:

Dabrowski-Tumanski, Pawel ; Stasiak, Andrzej
Molecules.  28 (2023)  22 - p. 7462 , 2023
Link: https://doi.org/10.3390/..
 
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2

A Topological Selection of Folding Pathways from Native Sta..:

Barbensi, Agnese ; Yerolemou, Naya ; Vipond, Oliver...
Symmetry.  13 (2021)  9 - p. 1670 , 2021
Link: https://doi.org/10.3390/..
 
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3

Lasso Proteins—Unifying Cysteine Knots and Miniproteins:

Greń, Bartosz Ambroży ; Dabrowski-Tumanski, Pawel ; Niemyska, Wanda.
Polymers.  13 (2021)  22 - p. 3988 , 2021
Link: https://doi.org/10.3390/..
 
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4

Molecule Edit Graph Attention Network: Modeling Chemical Re..:

Sacha, Mikołaj ; Błaż, Mikołaj ; Byrski, Piotr...
Journal of Chemical Information and Modeling.  61 (2021)  7 - p. 3273-3284 , 2021
Link: https://doi.org/10.1021/..
 
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5

Topoly: Python package to analyze topology of polymers:

Dabrowski-Tumanski, Pawel ; Rubach, Pawel ; Niemyska, Wanda..
Briefings in Bioinformatics.  22 (2020)  3 - p. , 2020
Link: https://doi.org/10.1093/..
 
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6

Statistical Properties of Lasso-Shape Polymers and Their Im..:

Dabrowski-Tumanski, Pawel ; Gren, Bartosz ; Sulkowska, Joanna I.
Polymers.  11 (2019)  4 - p. 707 , 2019
Link: https://doi.org/10.3390/..
 
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7

Protein Knotting by Active Threading of Nascent Polypeptide..:

Dabrowski-Tumanski, Pawel ; Piejko, Maciej ; Niewieczerzal, Szymon..
The Journal of Physical Chemistry B.  122 (2018)  49 - p. 11616-11625 , 2018
Link: https://doi.org/10.1021/..
 
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8

KnotProt 2.0: a database of proteins with knots and other e..:

Dabrowski-Tumanski, Pawel ; Rubach, Pawel ; Goundaroulis, Dimos...
Nucleic Acids Research.  47 (2018)  D1 - p. D367-D375 , 2018
Link: https://doi.org/10.1093/..
 
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9

The APS-bracket – A topological tool to classify lasso prot..:

Dabrowski-Tumanski, Pawel ; Sulkowska, Joanna I.
Reactive and Functional Polymers.  132 (2018)  - p. 19-25 , 2018
Link: https://doi.org/10.1016/..
 
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10

The exclusive effects of chaperonin on the behavior of prot..:

Zhao, Yani ; Dabrowski-Tumanski, Pawel ; Niewieczerzal, Szymon..
PLOS Computational Biology.  14 (2018)  3 - p. e1005970 , 2018
Link: https://doi.org/10.1371/..
 
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11

Genus trace reveals the topological complexity and domain s..:

Zając, Sebastian ; Geary, Cody ; Andersen, Ebbe Sloth...
Scientific Reports.  8 (2018)  1 - p. , 2018
Link: https://doi.org/10.1038/..
 
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12

PyLasso: a PyMOL plugin to identify lassos:

Gierut, Aleksandra M ; Niemyska, Wanda ; Dabrowski-Tumanski, Pawel...
Bioinformatics.  33 (2017)  23 - p. 3819-3821 , 2017
Link: https://doi.org/10.1093/..
 
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13

To Tie or Not to Tie? That Is the Question:

Dabrowski-Tumanski, Pawel ; Sulkowska, Joanna
Polymers.  9 (2017)  9 - p. 454 , 2017
Link: https://doi.org/10.3390/..
 
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14

Topological knots and links in proteins:

Dabrowski-Tumanski, Pawel ; Sulkowska, Joanna I.
Proceedings of the National Academy of Sciences of the United States of America.  114 (2017)  13 - p. 3415-3420 , 2017
Link: https://www.jstor.org/st..
 
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15

Topological knots and links in proteins:

Dabrowski-Tumanski, Pawel ; Sulkowska, Joanna I.
Proceedings of the National Academy of Sciences.  114 (2017)  13 - p. 3415-3420 , 2017
Link: https://doi.org/10.1073/..
 
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