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Dantas Machado, Ana Carolina
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1

Time of sample collection is critical for the replicability..:

Allaband, Celeste ; Lingaraju, Amulya ; Flores Ramos, Stephany...
Nature Metabolism.  6 (2024)  7 - p. 1282-1293 , 2024
Link: https://doi.org/10.1038/..
 
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2

DNA binding specificity of all four Saccharomyces cerevisia..:

Cooper, Brendon H ; Dantas Machado, Ana Carolina ; Gan, Yan..
Nucleic Acids Research.  51 (2023)  11 - p. 5621-5633 , 2023
Link: https://doi.org/10.1093/..
 
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3

Portosystemic shunt placement reveals blood signatures for ..:

Dantas Machado, Ana Carolina ; Ramos, Stephany Flores ; Gauglitz, Julia M....
Nature Communications.  14 (2023)  1 - p. , 2023
Link: https://doi.org/10.1038/..
 
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4

Diet and feeding pattern modulate diurnal dynamics of the i..:

Dantas Machado, Ana Carolina ; Brown, Steven D. ; Lingaraju, Amulya...
Cell Reports.  40 (2022)  1 - p. 111008 , 2022
Link: https://doi.org/10.1016/..
 
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5

Intermittent Hypoxia and Hypercapnia Alter Diurnal Rhythms ..:

Allaband, Celeste ; Lingaraju, Amulya ; Martino, Cameron...
mSystems.  6 (2021)  3 - p. , 2021
Link: https://doi.org/10.1128/..
 
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6

Crystal Structures of Ternary Complexes of MEF2 and NKX2–5 ..:

Lei, Xiao ; Zhao, Jun ; Sagendorf, Jared M....
Journal of Molecular Biology.  432 (2020)  19 - p. 5499-5508 , 2020
Link: https://doi.org/10.1016/..
 
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7

The RNA Polymerase α Subunit Recognizes the DNA Shape of th..:

Lara-Gonzalez, Samuel ; Dantas Machado, Ana Carolina ; Rao, Satyanarayan...
Biochemistry.  59 (2020)  48 - p. 4523-4532 , 2020
Link: https://doi.org/10.1021/..
 
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8

Landscape of DNA binding signatures of myocyte enhancer fac..:

Dantas Machado, Ana Carolina ; Cooper, Brendon H ; Lei, Xiao...
Nucleic Acids Research.  48 (2020)  15 - p. 8529-8544 , 2020
Link: https://doi.org/10.1093/..
 
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9

Structure of the Forkhead Domain of FOXA2 Bound to a Comple..:

Li, Jun ; Dantas Machado, Ana Carolina ; Guo, Ming...
Biochemistry.  56 (2017)  29 - p. 3745-3753 , 2017
Link: https://doi.org/10.1021/..
 
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10

Unraveling determinants of transcription factor binding out..:

Levo, Michal ; Zalckvar, Einat ; Sharon, Eilon...
Genome Research.  25 (2015)  7 - p. 1018-1029 , 2015
Link: https://doi.org/10.1101/..
 
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11

Absence of a simple code: how transcription factors read th..:

Slattery, Matthew ; Zhou, Tianyin ; Yang, Lin...
Trends in Biochemical Sciences.  39 (2014)  9 - p. 381-399 , 2014
Link: https://doi.org/10.1016/..
 
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12

Structure of p53 binding to the BAX response element reveal..:

Chen, Yongheng ; Zhang, Xiaojun ; Dantas Machado, Ana Carolina...
Nucleic Acids Research.  41 (2013)  17 - p. 8368-8376 , 2013
Link: https://doi.org/10.1093/..
 
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13

Conformations of p53 response elements in solution deduced ..:

Zhang, Xiaojun ; Dantas Machado, Ana Carolina ; Ding, Yuan...
Nucleic Acids Research.  42 (2013)  4 - p. 2789-2797 , 2013
Link: https://doi.org/10.1093/..
 
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14

Probing DNA shape and methylation state on a genomic scale ..:

Lazarovici, Allan ; Zhou, Tianyin ; Shafer, Anthony...
Proceedings of the National Academy of Sciences.  110 (2013)  16 - p. 6376-6381 , 2013
Link: https://doi.org/10.1073/..
 
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15

DNAshape: a method for the high-throughput prediction of DN..:

Zhou, Tianyin ; Yang, Lin ; Lu, Yan...
Nucleic Acids Research.  41 (2013)  W1 - p. W56-W62 , 2013
Link: https://doi.org/10.1093/..
 
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