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Das, Rhiju
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1

Minimization of the E. coli ribosome, aided and optimized b..:

Tangpradabkul, Tiyaporn ; Palo, Michael ; Townley, Jill...
Nucleic Acids Research.  52 (2024)  3 - p. 1027-1042 , 2024
Link: https://doi.org/10.1093/..
 
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2

Tertiary folds of the SL5 RNA from the 5′ proximal region o..:

Kretsch, Rachael C. ; Xu, Lily ; Zheludev, Ivan N....
Proceedings of the National Academy of Sciences.  121 (2024)  10 - p. , 2024
Link: https://doi.org/10.1073/..
 
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3

New prediction categories in CASP15:

Kryshtafovych, Andriy ; Antczak, Maciej ; Szachniuk, Marta...
Proteins: Structure, Function, and Bioinformatics.  91 (2023)  12 - p. 1550-1557 , 2023
Link: https://doi.org/10.1002/..
 
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4

Assessment of three‐dimensional RNA structure prediction in..:

Das, Rhiju ; Kretsch, Rachael C. ; Simpkin, Adam J....
Proteins: Structure, Function, and Bioinformatics.  91 (2023)  12 - p. 1747-1770 , 2023
Link: https://doi.org/10.1002/..
 
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5

Cover Image, Volume 91, Issue 12:

Das, Rhiju ; Kretsch, Rachael C. ; Simpkin, Adam J....
Proteins: Structure, Function, and Bioinformatics.  91 (2023)  12 - p. , 2023
Link: https://doi.org/10.1002/..
 
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6

CASP15 cryo‐EM protein and RNA targets: Refinement and anal..:

Mulvaney, Thomas ; Kretsch, Rachael C. ; Elliott, Luc...
Proteins: Structure, Function, and Bioinformatics.  91 (2023)  12 - p. 1935-1951 , 2023
Link: https://doi.org/10.1002/..
 
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7

RNA target highlights in CASP15: Evaluation of predicted mo..:

Kretsch, Rachael C. ; Andersen, Ebbe S. ; Bujnicki, Janusz M....
Proteins: Structure, Function, and Bioinformatics.  91 (2023)  12 - p. 1600-1615 , 2023
Link: https://doi.org/10.1002/..
 
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8

Modeling of RNA-only structures:

Das, Rhiju
Biophysical Journal.  122 (2023)  3 - p. 27a , 2023
Link: https://doi.org/10.1016/..
 
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9

Community science designed ribosomes with beneficial phenot..:

Krüger, Antje ; Watkins, Andrew M. ; Wellington-Oguri, Roger...
Nature Communications.  14 (2023)  1 - p. , 2023
Link: https://doi.org/10.1038/..
 
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10

Visualization of human telomerase holoenzyme by cryo‐EM:

Nguyen, Kelly ; Ghanim, George ; Roon, Anne‐Marie M....
The FASEB Journal.  36 (2022)  S1 - p. , 2022
Link: https://doi.org/10.1096/..
 
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11

RNA secondary structure packages evaluated and improved by ..:

Wayment-Steele, Hannah K. ; Kladwang, Wipapat ; Strom, Alexandra I....
Nature Methods.  19 (2022)  10 - p. 1234-1242 , 2022
Link: https://doi.org/10.1038/..
 
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12

Combinatorial optimization of mRNA structure, stability, an..:

Leppek, Kathrin ; Byeon, Gun Woo ; Kladwang, Wipapat...
Nature Communications.  13 (2022)  1 - p. , 2022
Link: https://doi.org/10.1038/..
 
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13

Crowdsourced RNA design discovers diverse, reversible, effi..:

Andreasson, Johan O. L. ; Gotrik, Michael R. ; Wu, Michelle J....
Proceedings of the National Academy of Sciences.  119 (2022)  18 - p. , 2022
Link: https://doi.org/10.1073/..
 
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14

Computationally-guided design and selection of high perform..:

Kofman, Camila ; Watkins, Andrew M ; Kim, Do Soon...
Nucleic Acids Research.  50 (2022)  22 - p. 13143-13154 , 2022
Link: https://doi.org/10.1093/..
 
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15

Deep learning models for predicting RNA degradation via dua..:

Wayment-Steele, Hannah K. ; Kladwang, Wipapat ; Watkins, Andrew M....
Nature Machine Intelligence.  4 (2022)  12 - p. 1174-1184 , 2022
Link: https://doi.org/10.1038/..
 
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