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Dunin-Horkawicz, Stanislaw
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1

pLM-BLAST: distant homology detection based on direct compa..:

Kaminski, Kamil ; Ludwiczak, Jan ; Pawlicki, Kamil...
Bioinformatics.  39 (2023)  10 - p. , 2023
Link: https://doi.org/10.1093/..
 
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2

Ongoing shuffling of protein fragments diversifies core vir..:

Smug, Bogna J. ; Szczepaniak, Krzysztof ; Rocha, Eduardo P. C...
Nature Communications.  14 (2023)  1 - p. , 2023
Link: https://doi.org/10.1038/..
 
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3

Siah-1-interacting protein regulates mutated huntingtin pro..:

Latoszek, Ewelina ; Wiweger, Małgorzata ; Ludwiczak, Jan...
Cell & Bioscience.  12 (2022)  1 - p. , 2022
Link: https://doi.org/10.1186/..
 
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4

localpdb—a Python package to manage protein structures and ..:

Ludwiczak, Jan ; Winski, Aleksander ; Dunin-Horkawicz, Stanislaw.
Bioinformatics.  38 (2022)  9 - p. 2633-2635 , 2022
Link: https://doi.org/10.1093/..
 
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5

Rossmann-toolbox: a deep learning-based protocol for the pr..:

Kamiński, Kamil ; Ludwiczak, Jan ; Jasiński, Maciej...
Briefings in Bioinformatics.  23 (2021)  1 - p. , 2021
Link: https://doi.org/10.1093/..
 
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6

Interplay between DsbA1, DsbA2 and C8J_1298 Periplasmic Oxi..:

Banaś, Anna M. ; Bocian-Ostrzycka, Katarzyna M. ; Dunin-Horkawicz, Stanisław...
International Journal of Molecular Sciences.  22 (2021)  24 - p. 13451 , 2021
Link: https://doi.org/10.3390/..
 
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7

Slipknotted and unknotted monovalent cation-proton antiport..:

Zayats, Vasilina ; Perlinska, Agata P. ; Jarmolinska, Aleksandra I....
PLOS Computational Biology.  17 (2021)  10 - p. e1009502 , 2021
Link: https://doi.org/10.1371/..
 
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8

A library of coiled-coil domains: from regular bundles to p..:

Szczepaniak, Krzysztof ; Bukala, Adriana ; da Silva Neto, Antonio Marinho...
Bioinformatics.  36 (2020)  22-23 - p. 5368-5376 , 2020
Link: https://doi.org/10.1093/..
 
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9

Self-analysis of repeat proteins reveals evolutionarily con..:

Merski, Matthew ; Młynarczyk, Krzysztof ; Ludwiczak, Jan...
BMC Bioinformatics.  21 (2020)  1 - p. , 2020
Link: https://doi.org/10.1186/..
 
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10

C8J_1298, a bifunctional thiol oxidoreductase of Campylobac..:

Banaś, Anna Marta ; Bocian-Ostrzycka, Katarzyna Marta ; Plichta, Maciej...
PLOS ONE.  15 (2020)  3 - p. e0230366 , 2020
Link: https://doi.org/10.1371/..
 
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11

ANO5 mutations in the Polish limb girdle muscular dystrophy..:

Jarmula, Adam ; Łusakowska, Anna ; Fichna, Jakub P....
Scientific Reports.  9 (2019)  1 - p. , 2019
Link: https://doi.org/10.1038/..
 
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12

RRMdb—an evolutionary-oriented database of RNA recognition ..:

Nowacka, Martyna ; Boccaletto, Pietro ; Jankowska, Elzbieta...
Database.  2019 (2019)  - p. , 2019
Link: https://doi.org/10.1093/..
 
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13

PiPred – a deep-learning method for prediction of π-helices..:

Ludwiczak, Jan ; Winski, Aleksander ; da Silva Neto, Antonio Marinho...
Scientific Reports.  9 (2019)  1 - p. , 2019
Link: https://doi.org/10.1038/..
 
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14

Combining Rosetta with molecular dynamics (MD): A benchmark..:

Ludwiczak, Jan ; Jarmula, Adam ; Dunin-Horkawicz, Stanislaw
Journal of Structural Biology.  203 (2018)  1 - p. 54-61 , 2018
Link: https://doi.org/10.1016/..
 
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15

Impact of selected amino acids of HP0377 (Helicobacter pylo..:

Grzeszczuk, Magdalena Joanna ; Bąk, Aleksandra ; Banaś, Anna Marta...
PLOS ONE.  13 (2018)  4 - p. e0195358 , 2018
Link: https://doi.org/10.1371/..
 
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