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Gabdank, Idan
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1

Multicenter integrated analysis of noncoding CRISPRi screen:

Yao, David ; Tycko, Josh ; Oh, Jin Woo...
Nature Methods.  21 (2024)  4 - p. 723-734 , 2024
Link: https://doi.org/10.1038/..
 
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2

Recompleting the Caenorhabditis elegans genome:

Yoshimura, Jun ; Ichikawa, Kazuki ; Shoura, Massa J....
Genome Research.  29 (2019)  6 - p. 1009-1022 , 2019
Link: https://doi.org/10.1101/..
 
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3

New developments on the Encyclopedia of DNA Elements (ENCOD..:

Cherry, J Michael ; O'Neill, Emma ; Adenekan, Philip...
Nucleic Acids Research.  48 (2019)  D1 - p. D882-D889 , 2019
Link: https://doi.org/10.1093/..
 
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4

The ENCODE Portal as an Epigenomics Resource:

Jou, Jennifer ; Gabdank, Idan ; Luo, Yunhai...
Current Protocols in Bioinformatics.  68 (2019)  1 - p. , 2019
Link: https://doi.org/10.1002/..
 
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5

Prevention of data duplication for high throughput sequenci..:

Gabdank, Idan ; Chan, Esther T ; Davidson, Jean M...
Database.  2018 (2018)  - p. , 2018
Link: https://doi.org/10.1093/..
 
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6

The Encyclopedia of DNA elements (ENCODE): data portal upda..:

Davis, Carrie A ; Hitz, Benjamin C ; Sloan, Cricket A...
Nucleic Acids Research.  46 (2017)  D1 - p. D794-D801 , 2017
Link: https://doi.org/10.1093/..
 
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7

SnoVault and encodeD: A novel object-based storage system a..:

Hitz, Benjamin C. ; Rowe, Laurence D. ; Podduturi, Nikhil R....
PLOS ONE.  12 (2017)  4 - p. e0175310 , 2017
Link: https://doi.org/10.1371/..
 
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8

A streamlined tethered chromosome conformation capture prot..:

Gabdank, Idan ; Ramakrishnan, Sreejith ; Villeneuve, Anne M..
BMC Genomics.  17 (2016)  1 - p. , 2016
Link: https://doi.org/10.1186/..
 
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9

Principles of metadata organization at the ENCODE data coor..:

Hong, Eurie L. ; Sloan, Cricket A. ; Chan, Esther T....
Database.  2016 (2016)  - p. baw001 , 2016
Link: https://doi.org/10.1093/..
 
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10

ENCODE data at the ENCODE portal:

Sloan, Cricket A. ; Chan, Esther T. ; Davidson, Jean M....
Nucleic Acids Research.  44 (2015)  D1 - p. D726-D732 , 2015
Link: https://doi.org/10.1093/..
 
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11

On topological indices for small RNA graphs:

Churkin, Alexander ; Gabdank, Idan ; Barash, Danny
Computational Biology and Chemistry.  41 (2012)  - p. 35-40 , 2012
Link: https://doi.org/10.1016/..
 
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12

Energy minimization methods applied to riboswitches: A pers..:

Barash, Danny ; Gabdank, Idan
RNA Biology.  7 (2010)  1 - p. 90-97 , 2010
Link: https://doi.org/10.4161/..
 
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13

FineStr: a web server for single-base-resolution nucleosome..:

Gabdank, Idan ; Barash, Danny ; Trifonov, Edward N.
Bioinformatics.  26 (2010)  6 - p. 845-846 , 2010
Link: https://doi.org/10.1093/..
 
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14

Tracing Ancient mRNA Hairpins:

Gabdank, Idan ; Barash, Danny ; Trifonov, Edward N.
Journal of Biomolecular Structure and Dynamics.  24 (2006)  2 - p. 163-169 , 2006
Link: https://doi.org/10.1080/..
 
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15

Primordia Vita. Deconvolution from Modern Sequences:

Trifonov, Edward N. ; Gabdank, Idan ; Barash, Danny.
Origins of Life and Evolution of Biospheres.  36 (2006)  5-6 - p. 559-565 , 2006
Link: https://doi.org/10.1007/..
 
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