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Heinonen, Markus
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1

S176: FUNCTIONAL AND ANTIGEN-SPECIFIC CHARACTERIZATION OF I..:

Huuhtanen, Jani ; Lundgren, Sofie ; Keränen, Mikko...
HemaSphere.  7 (2023)  S3 - p. e2285644 , 2023
Link: https://doi.org/10.1097/..
 
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2

Chemistry-Based Modeling on Phenotype-Based Drug-Induced Li..:

Moein, Mohammad ; Heinonen, Markus ; Mesens, Natalie...
Chemical Research in Toxicology.  36 (2023)  8 - p. 1238-1247 , 2023
Link: https://doi.org/10.1021/..
 
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3

Likelihood-free inference with deep Gaussian processes:

Aushev, Alexander ; Pesonen, Henri ; Heinonen, Markus..
Computational Statistics & Data Analysis.  174 (2022)  - p. 107529 , 2022
Link: https://doi.org/10.1016/..
 
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4

TCRconv: predicting recognition between T cell receptors an..:

Jokinen, Emmi ; Dumitrescu, Alexandru ; Huuhtanen, Jani...
Bioinformatics.  39 (2022)  1 - p. , 2022
Link: https://doi.org/10.1093/..
 
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5

Human-in-the-loop assisted de novo molecular design:

Sundin, Iiris ; Voronov, Alexey ; Xiao, Haoping...
Journal of Cheminformatics.  14 (2022)  1 - p. , 2022
Link: https://doi.org/10.1186/..
 
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6

Modeling binding specificities of transcription factor pair..:

Antikainen, Anni A. ; Heinonen, Markus ; Lähdesmäki, Harri
BMC Bioinformatics.  23 (2022)  1 - p. , 2022
Link: https://doi.org/10.1186/..
 
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7

Predicting recognition between T cell receptors and epitope..:

Jokinen, Emmi ; Huuhtanen, Jani ; Mustjoki, Satu...
PLOS Computational Biology.  17 (2021)  3 - p. e1008814 , 2021
Link: https://doi.org/10.1371/..
 
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8

Prediction and impact of personalized donation intervals:

Toivonen, Jarkko ; Koski, Yrjö ; Turkulainen, Esa...
Vox Sanguinis.  117 (2021)  4 - p. 504-512 , 2021
Link: https://doi.org/10.1111/..
 
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9

Substrate specificity of 2-deoxy-D-ribose 5-phosphate aldol..:

Voutilainen, Sanni ; Heinonen, Markus ; Andberg, Martina...
Applied Microbiology and Biotechnology.  104 (2020)  24 - p. 10515-10529 , 2020
Link: https://doi.org/10.1007/..
 
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10

Deep Convolutional Gaussian Processes:

, In: Machine Learning and Knowledge Discovery in Databases; Lecture Notes in Computer Science,
Blomqvist, Kenneth ; Kaski, Samuel ; Heinonen, Markus - p. 582-597 , 2020
Link: https://doi.org/10.1007/..
 
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11

Bayesian metabolic flux analysis reveals intracellular flux..:

Heinonen, Markus ; Osmala, Maria ; Mannerström, Henrik...
Bioinformatics.  35 (2019)  14 - p. i548-i557 , 2019
Link: https://doi.org/10.1093/..
 
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12

Learning with multiple pairwise kernels for drug bioactivit..:

Cichonska, Anna ; Pahikkala, Tapio ; Szedmak, Sandor...
Bioinformatics.  34 (2018)  13 - p. i509-i518 , 2018
Link: https://doi.org/10.1093/..
 
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13

Temporal clustering analysis of endothelial cell gene expre..:

Heinonen, Markus ; Milliat, Fabien ; Benadjaoud, Mohamed Amine...
PLOS ONE.  13 (2018)  10 - p. e0204960 , 2018
Link: https://doi.org/10.1371/..
 
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14

Flex ddG: Rosetta Ensemble-Based Estimation of Changes in P..:

Barlow, Kyle A. ; Ó Conchúir, Shane ; Thompson, Samuel...
The Journal of Physical Chemistry B.  122 (2018)  21 - p. 5389-5399 , 2018
Link: https://doi.org/10.1021/..
 
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15

mGPfusion: predicting protein stability changes with Gaussi..:

Jokinen, Emmi ; Heinonen, Markus ; Lähdesmäki, Harri
Bioinformatics.  34 (2018)  13 - p. i274-i283 , 2018
Link: https://doi.org/10.1093/..
 
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