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Heumos, Simon
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1

nf-core/airrflow: An adaptive immune receptor repertoire an..:

Gabernet, Gisela ; Marquez, Susanna ; Bjornson, Robert...
PLOS Computational Biology.  20 (2024)  7 - p. e1012265 , 2024
Link: https://doi.org/10.1371/..
 
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2

Wheeler Maps:

, In: Lecture Notes in Computer Science; LATIN 2024: Theoretical Informatics,
Baláž, Andrej ; Gagie, Travis ; Goga, Adrián... - p. 178-192 , 2024
Link: https://doi.org/10.1007/..
 
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3

Pangenome graph layout by Path-Guided Stochastic Gradient D..:

Heumos, Simon ; Guarracino, Andrea ; Schmelzle, Jan-Niklas M...
Bioinformatics.  40 (2024)  7 - p. , 2024
Link: https://doi.org/10.1093/..
 
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4

Integrative proteomics highlight presynaptic alterations an..:

Aly, Amr ; Laszlo, Zsofia I. ; Rajkumar, Sandeep...
Acta Neuropathologica.  146 (2023)  3 - p. 451-475 , 2023
Link: https://doi.org/10.1007/..
 
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5

A draft human pangenome reference:

Liao, Wen-Wei ; Asri, Mobin ; Ebler, Jana...
Nature.  617 (2023)  7960 - p. 312-324 , 2023
Link: https://doi.org/10.1038/..
 
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6

Correction to: Integrative proteomics highlight presynaptic..:

Aly, Amr ; Laszlo, Zsofia I. ; Rajkumar, Sandeep...
Acta Neuropathologica.  146 (2023)  5 - p. 783-783 , 2023
Link: https://doi.org/10.1007/..
 
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7

A Perspective on Plant Phenomics: Coupling Deep Learning an..:

Vasseur, François ; Cornet, Denis ; Beurier, Grégory...
Frontiers in Plant Science.  13 (2022)  - p. , 2022
Link: https://doi.org/10.3389/..
 
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8

Multiomics surface receptor profiling of the NCI-60 tumor c..:

Heumos, Simon ; Dehn, Sandra ; Bräutigam, Konstantin...
Cancer Cell International.  22 (2022)  1 - p. , 2022
Link: https://doi.org/10.1186/..
 
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9

ODGI: understanding pangenome graphs:

Guarracino, Andrea ; Heumos, Simon ; Nahnsen, Sven...
Bioinformatics.  38 (2022)  13 - p. 3319-3326 , 2022
Link: https://doi.org/10.1093/..
 
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10

Specific Induction of Double Negative B Cells During Protec..:

Ruschil, Christoph ; Gabernet, Gisela ; Lepennetier, Gildas...
Frontiers in Immunology.  11 (2020)  - p. , 2020
Link: https://doi.org/10.3389/..
 
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11

PSM Peptides From Community-Associated Methicillin-Resistan..:

Richardson, Jennifer R. ; Armbruster, Nicole S. ; Günter, Manina...
Frontiers in Immunology.  10 (2019)  - p. , 2019
Link: https://doi.org/10.3389/..
 
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12

Platelets Aggregate With Neutrophils and Promote Skin Patho..:

Herster, Franziska ; Bittner, Zsofia ; Codrea, Marius Cosmin...
Frontiers in Immunology.  10 (2019)  - p. , 2019
Link: https://doi.org/10.3389/..
 
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13

Central European Woolly Mammoth Population Dynamics: Insigh..:

Fellows Yates, James A. ; Drucker, Dorothée G. ; Reiter, Ella...
Scientific Reports.  7 (2017)  1 - p. , 2017
Link: https://doi.org/10.1038/..
 
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14

Optimized Dynamic Genome/Graph Implementation (ODGI):

Guarracino, Andrea ; Heumos, Simon ; Nahnsen, Sven..
https://github.com/pangenome/odgi/tree/v0.8.3.  , 2023
Link: https://zenodo.org/recor..
 
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15

Correction to: Integrative proteomics highlight presynaptic..:

Aly, Amr ; Laszlo, Zsofia I ; Rajkumar, Sandeep...
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC10564658/.  , 2023
Link: http://www.ncbi.nlm.nih...
 
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