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Hodcroft, Emma
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1

The International Virus Bioinformatics Meeting 2022:

Hufsky, Franziska ; Beslic, Denis ; Boeckaerts, Dimitri...
Viruses.  14 (2022)  5 - p. 973 , 2022
Link: https://doi.org/10.3390/..
 
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2

Future-proofing and maximizing the utility of metadata: The..:

Griffiths, Emma J ; Timme, Ruth E ; Mendes, Catarina Inês...
GigaScience.  11 (2022)  - p. , 2022
Link: https://doi.org/10.1093/..
 
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3

Urgent need for a non-discriminatory and non-stigmatizing n..:

Happi, Christian ; Adetifa, Ifedayo ; Mbala, Placide...
PLOS Biology.  20 (2022)  8 - p. e3001769 , 2022
Link: https://doi.org/10.1371/..
 
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4

SARS-CoV-2 Variants of Interest and Concern naming scheme c..:

Konings, Frank ; Perkins, Mark D. ; Kuhn, Jens H....
Nature Microbiology.  6 (2021)  7 - p. 821-823 , 2021
Link: https://doi.org/10.1038/..
 
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5

Molecular Epidemiology and Evolutionary Trajectory of Emerg..:

Benschop, Kimberley S.M. ; Broberg, Eeva K. ; Hodcroft, Emma...
Emerging Infectious Diseases.  27 (2021)  6 - p. 1616-1626 , 2021
Link: https://doi.org/10.3201/..
 
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6

Augur: a bioinformatics toolkit for phylogenetic analyses o..:

Huddleston, John ; Hadfield, James ; Sibley, Thomas...
Journal of Open Source Software.  6 (2021)  57 - p. 2906 , 2021
Link: https://doi.org/10.21105..
 
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7

Nextclade: clade assignment, mutation calling and quality c..:

Aksamentov, Ivan ; Roemer, Cornelius ; Hodcroft, Emma.
Journal of Open Source Software.  6 (2021)  67 - p. 3773 , 2021
Link: https://doi.org/10.21105..
 
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8

COVID-19 epidemic in Switzerland: on the importance of test..:

Salath, Marcel ; Althaus, Christian L. ; Neher, Richard...
Swiss Medical Weekly.  , 2020
Link: https://doi.org/10.4414/..
 
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9

The Contribution of Viral Genotype to Plasma Viral Set-Poin..:

Hodcroft, Emma ; Hadfield, Jarrod D. ; Fearnhill, Esther...
PLoS Pathogens.  10 (2014)  5 - p. e1004112 , 2014
Link: https://doi.org/10.1371/..
 
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10

Automated analysis of phylogenetic clusters:

Ragonnet-Cronin, Manon ; Hodcroft, Emma ; Hué, Stéphane...
BMC Bioinformatics.  14 (2013)  1 - p. , 2013
Link: https://doi.org/10.1186/..
 
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11

An updated framework for SARS-CoV-2 variants reflects the u..:

Subissi, Lorenzo ; Otieno, James Richard ; Worp, Nathalie...
Nature Medicine.  , 2024
Link: https://doi.org/10.1038/..
 
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12

The role of socio-economic disparities in the relative succ..:

Vasylyeva, Tetyana I. ; Havens, Jennifer L. ; Wang, Jade C....
PLOS Pathogens.  20 (2024)  6 - p. e1012288 , 2024
Link: https://doi.org/10.1371/..
 
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13

Epidemiological and Clinical Insights into the Enterovirus ..:

Simoes, Margarida Pires ; Hodcroft, Emma B ; Simmonds, Peter...
The Journal of Infectious Diseases.  , 2024
Link: https://doi.org/10.1093/..
 
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14

Functional SARS-CoV-2 cross-reactive CD4+T cells establishe..:

Humbert, Marion ; Olofsson, Anna ; Wullimann, David...
Proceedings of the National Academy of Sciences.  120 (2023)  12 - p. , 2023
Link: https://doi.org/10.1073/..
 
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15

Importation of Alpha and Delta variants during the SARS-CoV..:

Reichmuth, Martina L. ; Hodcroft, Emma B. ; Althaus, Christian L..
PLOS Pathogens.  19 (2023)  8 - p. e1011553 , 2023
Link: https://doi.org/10.1371/..
 
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