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Hoikkala, Ville
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1

Bioinformatic analysis of type III CRISPR systems reveals k..:

Hoikkala, Ville ; Graham, Shirley ; White, Malcolm F
Nucleic Acids Research.  52 (2024)  12 - p. 7129-7141 , 2024
Link: https://doi.org/10.1093/..
 
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2

Chromosomal Inversions and the Demography of Speciation in ..:

Poikela, Noora ; Laetsch, Dominik R ; Hoikkala, Ville...
Genome Biology and Evolution.  16 (2024)  3 - p. , 2024
Link: https://doi.org/10.1093/..
 
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3

Antiviral type III CRISPR signalling via conjugation of ATP..:

Chi, Haotian ; Hoikkala, Ville ; Grüschow, Sabine...
Nature.  622 (2023)  7984 - p. 826-833 , 2023
Link: https://doi.org/10.1038/..
 
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4

Multispecies coinfections and presence of antibiotics shape..:

Ashrafi, Roghaieh ; Bruneaux, Matthieu ; Sundberg, Lotta‐Riina..
Molecular Ecology.  32 (2023)  15 - p. 4447-4460 , 2023
Link: https://doi.org/10.1111/..
 
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5

Mucin induces CRISPR-Cas defense in an opportunistic pathog..:

de Freitas Almeida, Gabriel Magno ; Hoikkala, Ville ; Ravantti, Janne..
Nature Communications.  13 (2022)  1 - p. , 2022
Link: https://doi.org/10.1038/..
 
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6

Cooperation between Different CRISPR-Cas Types Enables Adap..:

Hoikkala, Ville ; Ravantti, Janne ; Díez-Villaseñor, César...
mBio.  12 (2021)  2 - p. , 2021
Link: https://doi.org/10.1128/..
 
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7

Adapting a Phage to Combat Phage Resistance:

Laanto, Elina ; Mäkelä, Kati ; Hoikkala, Ville..
Antibiotics.  9 (2020)  6 - p. 291 , 2020
Link: https://doi.org/10.3390/..
 
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8

Aquaculture as a source of empirical evidence for coevoluti..:

Hoikkala, Ville ; Almeida, Gabriel M. F. ; Laanto, Elina.
Philosophical Transactions: Biological Sciences.  374 (2019)  1772 - p. 1-8 , 2019
Link: https://www.jstor.org/st..
 
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9

Gliding Motility and Expression of Motility-Related Genes i..:

Penttinen, Reetta ; Hoikkala, Ville ; Sundberg, Lotta-Riina
Frontiers in Microbiology.  9 (2018)  - p. , 2018
Link: https://doi.org/10.3389/..
 
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10

Long-term genomic coevolution of host-parasite interaction ..:

Laanto, Elina ; Hoikkala, Ville ; Ravantti, Janne.
Nature Communications.  8 (2017)  1 - p. , 2017
Link: https://doi.org/10.1038/..
 
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11

Chasing the Origin of Viruses: Capsid-Forming Genes as a Li..:

Jalasvuori, Matti ; Mattila, Sari ; Hoikkala, Ville.
PLOS ONE.  10 (2015)  5 - p. e0126094 , 2015
Link: https://doi.org/10.1371/..
 
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12

Evolutionary rescue of bacteria via horizontal gene transfe..:

Ojala, Ville ; Mattila, Sari ; Hoikkala, Ville..
Journal of Global Antimicrobial Resistance.  2 (2014)  3 - p. 198-200 , 2014
Link: https://doi.org/10.1016/..
 
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13

Multispecies coinfections and presence of antibiotics shape..:

Ashrafi, Roghaieh ; Bruneaux, Matthieu ; Sundberg, Lotta-Riina..
doi:10.5061/dryad.0p2ngf25s.  , 2023
Link: https://zenodo.org/recor..
 
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14

Antiviral type III CRISPR signalling via conjugation of ATP..:

Chi, Haotian ; Hoikkala, Ville ; Grüschow, Sabine...
Nature.  , 2023
Link: http://urn.fi/URN:NBN:fi..
 
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15

Multispecies coinfections and presence of antibiotics shape..:

Ashrafi, Roghaieh ; Bruneaux, Matthieu ; Sundberg, Lotta-Riina..
doi:10.5281/zenodo.7976268.  , 2023
Link: https://zenodo.org/recor..
 
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