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Ideker, Trey
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1

Cancer Mutations Converge on a Collection of Protein Assemb..:

Zhao, Xiaoyu ; Singhal, Akshat ; Park, Sungjoon...
Cancer Discovery.  14 (2024)  3 - p. 508-523 , 2024
Link: https://doi.org/10.1158/..
 
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2

Rare and common variants associated with alcohol consumptio..:

Leger, Brittany S. ; Meredith, John J. ; Ideker, Trey..
Alcohol, Clinical and Experimental Research.  , 2024
Link: https://doi.org/10.1111/..
 
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3

Representing mutations for predicting cancer drug response:

Wall, Patrick ; Ideker, Trey
Bioinformatics.  40 (2024)  Supplement_1 - p. i160-i168 , 2024
Link: https://doi.org/10.1093/..
 
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4

Opportunities for basic, clinical, and bioethics research a..:

Sen, Shurjo K. ; Green, Eric D. ; Hutter, Carolyn M....
Cell Genomics.  4 (2024)  1 - p. 100466 , 2024
Link: https://doi.org/10.1016/..
 
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5

Interface-guided phenotyping of coding variants in the tran..:

Ozturk, Kivilcim ; Panwala, Rebecca ; Sheen, Jeanna...
Cell Reports.  43 (2024)  7 - p. 114436 , 2024
Link: https://doi.org/10.1016/..
 
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6

In vitro evolution and whole genome analysis to study chemo..:

Jado, Juan Carlos ; Dow, Michelle ; Carolino, Krypton...
Scientific Reports.  14 (2024)  1 - p. , 2024
Link: https://doi.org/10.1038/..
 
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7

De novo generation of multi-target compounds using deep gen..:

Munson, Brenton P. ; Chen, Michael ; Bogosian, Audrey...
Nature Communications.  15 (2024)  1 - p. , 2024
Link: https://doi.org/10.1038/..
 
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8

A deep learning model of tumor cell architecture elucidates..:

Park, Sungjoon ; Silva, Erica ; Singhal, Akshat...
Nature Cancer.  5 (2024)  7 - p. 996-1009 , 2024
Link: https://doi.org/10.1038/..
 
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9

Autism-associated CHD8 controls reactive gliosis and neuroi..:

Megagiannis, Platon ; Mei, Yuan ; Yan, Rachel E....
Cell Reports.  43 (2024)  8 - p. 114637 , 2024
Link: https://doi.org/10.1016/..
 
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10

Hierarchical association of COPD to principal genetic compo..:

Carlin, Daniel E. ; Larsen, Simon J. ; Sirupurapu, Vikram...
PLOS ONE.  18 (2023)  5 - p. e0286064 , 2023
Link: https://doi.org/10.1371/..
 
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11

GABA Regulates Electrical Activity and Tumor Initiation in ..:

Tagore, Mohita ; Hergenreder, Emiliano ; Perlee, Sarah C....
Cancer Discovery.  13 (2023)  10 - p. 2270-2291 , 2023
Link: https://doi.org/10.1158/..
 
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12

Transcriptomic profiling of neurons from lithium-treated mo..:

Tan, Xinzhu ; Mei, Yuan ; Chaumette, Boris...
Journal of the Neurological Sciences.  455 (2023)  - p. 122518 , 2023
Link: https://doi.org/10.1016/..
 
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13

Multimodal perturbation analyses of cyclin-dependent kinase..:

Ford, Kyle ; Munson, Brenton P. ; Fong, Samson H....
Scientific Reports.  13 (2023)  1 - p. , 2023
Link: https://doi.org/10.1038/..
 
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14

NDEx IQuery: a multi-method network gene set analysis lever..:

Pillich, Rudolf T ; Chen, Jing ; Churas, Christopher...
Bioinformatics.  39 (2023)  3 - p. , 2023
Link: https://doi.org/10.1093/..
 
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15

Mapping the common gene networks that underlie related dise..:

Rosenthal, Sara Brin ; Wright, Sarah N. ; Liu, Sophie...
Nature Protocols.  18 (2023)  6 - p. 1745-1759 , 2023
Link: https://doi.org/10.1038/..
 
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