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Jordan Eizenga
111  results:
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1

Hydroxymethylation profile of cell-free DNA is a biomarker ..:

Walker, Nicolas J. ; Rashid, Mamunur ; Yu, Shirong...
Scientific Reports.  12 (2022)  1 - p. , 2022
Link: https://doi.org/10.1038/..
 
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2

A complete pedigree-based graph workflow for rare candidate..:

Markello, Charles ; Huang, Charles ; Rodriguez, Alex...
Genome Research.  , 2022
Link: https://doi.org/10.1101/..
 
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3

A strategy for building and using a human reference pangeno..:

Llamas, Bastien ; Narzisi, Giuseppe ; Schneider, Valerie...
F1000Research.  8 (2021)  - p. 1751 , 2021
Link: https://doi.org/10.12688..
 
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4

Genotyping structural variants in pangenome graphs using th..:

Hickey, Glenn ; Heller, David ; Monlong, Jean...
Genome Biology.  21 (2020)  1 - p. , 2020
Link: https://doi.org/10.1186/..
 
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5

Distance indexing and seed clustering in sequence graphs:

Chang, Xian ; Eizenga, Jordan ; Novak, Adam M..
Bioinformatics.  36 (2020)  Supplement_1 - p. i146-i153 , 2020
Link: https://doi.org/10.1093/..
 
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6

A strategy for building and using a human reference pangeno..:

Llamas, Bastien ; Narzisi, Giuseppe ; Schneider, Valerie...
F1000Research.  8 (2019)  - p. 1751 , 2019
Link: https://doi.org/10.12688..
 
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7

Aerosol Microbiome over the Mediterranean Sea Diversity and..:

Mescioglu, Esra ; Rahav, Eyal ; Belkin, Natalia...
Atmosphere.  10 (2019)  8 - p. 440 , 2019
Link: https://doi.org/10.3390/..
 
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8

Modelling haplotypes with respect to reference cohort varia..:

Rosen, Yohei ; Eizenga, Jordan ; Paten, Benedict
Bioinformatics.  33 (2017)  14 - p. i118-i123 , 2017
Link: https://doi.org/10.1093/..
 
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9

A draft human pangenome reference:

Liao, Wen-Wei ; Asri, Mobin ; Ebler, Jana...
Nature.  617 (2023)  7960 - p. 312-324 , 2023
Link: https://doi.org/10.1038/..
 
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10

Pangenome graph construction from genome alignments with Mi..:

Hickey, Glenn ; Monlong, Jean ; Ebler, Jana...
Nature Biotechnology.  , 2023
Link: https://doi.org/10.1038/..
 
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11

Haplotype-aware pantranscriptome analyses using spliced pan..:

Sibbesen, Jonas A. ; Eizenga, Jordan M. ; Novak, Adam M....
Nature Methods.  20 (2023)  2 - p. 239-247 , 2023
Link: https://doi.org/10.1038/..
 
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12

Pan-conserved segment tags identify ultra-conserved sequenc..:

Lee, HoJoon ; Greer, Stephanie U. ; Pavlichin, Dmitri S....
Cell Reports Methods.  3 (2023)  8 - p. 100543 , 2023
Link: https://doi.org/10.1016/..
 
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13

Optimal gap-affine alignment in O(s) space:

Marco-Sola, Santiago ; Eizenga, Jordan M ; Guarracino, Andrea...
Bioinformatics.  39 (2023)  2 - p. , 2023
Link: https://doi.org/10.1093/..
 
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14

Walk-Preserving Transformation of Overlapped Sequence Graph..:

, In: Lecture Notes in Computer Science; Connecting with Computability,
Eizenga, Jordan M. ; Lorig-Roach, Ryan ; Meredith, Melissa M.. - p. 169-177 , 2021
Link: https://doi.org/10.1007/..
 
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15

Pangenomics enables genotyping of known structural variants..:

Sirén, Jouni ; Monlong, Jean ; Chang, Xian...
Science.  374 (2021)  6574 - p. , 2021
Link: https://doi.org/10.1126/..
 
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