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Kahles, André
186  results:
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1

Database size positively correlates with the loss of specie..:

Commichaux, Seth ; Luan, Tu ; Muralidharan, Harihara Subrahmaniam..
PLOS Computational Biology.  20 (2024)  8 - p. e1012343 , 2024
Link: https://doi.org/10.1371/..
 
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2

SimReadUntil for benchmarking selective sequencing algorith..:

Mordig, Maximilian ; Rätsch, Gunnar ; Kahles, André.
Bioinformatics.  40 (2024)  5 - p. , 2024
Link: https://doi.org/10.1093/..
 
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3

Label-guided seed-chain-extend alignment on annotated De Br..:

Mustafa, Harun ; Karasikov, Mikhail ; Mansouri Ghiasi, Nika..
Bioinformatics.  40 (2024)  Supplement_1 - p. i337-i346 , 2024
Link: https://doi.org/10.1093/..
 
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4

Probabilistic pathway-based multimodal factor analysis:

Immer, Alexander ; Stark, Stefan G ; Jacob, Francis...
Bioinformatics.  40 (2024)  Supplement_1 - p. i189-i198 , 2024
Link: https://doi.org/10.1093/..
 
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5

Author Correction: Genomic basis for RNA alterations in can..:

PCAWG Transcriptome Core Group ; Calabrese, Claudia ; Davidson, Natalie R....
Nature.  , 2023
Link: https://doi.org/10.1038/..
 
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6

Mutant SF3B1 promotes malignancy in PDAC:

Simmler, Patrik ; Ioannidi, Eleonora I ; Mengis, Tamara...
eLife.  12 (2023)  - p. , 2023
Link: https://doi.org/10.7554/..
 
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7

Aligning distant sequences to graphs using long seed sketch..:

Joudaki, Amir ; Meterez, Alexandru ; Mustafa, Harun...
Genome Research.  , 2023
Link: https://doi.org/10.1101/..
 
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8

Interspecific comparison of gene expression profiles using ..:

Kasianov, Artem S. ; Klepikova, Anna V. ; Mayorov, Alexey V....
PLOS Computational Biology.  19 (2023)  1 - p. e1010743 , 2023
Link: https://doi.org/10.1371/..
 
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9

SECEDO: SNV-based subclone detection using ultra-low covera..:

Rozhoňová, Hana ; Danciu, Daniel ; Stark, Stefan...
Bioinformatics.  38 (2022)  18 - p. 4293-4300 , 2022
Link: https://doi.org/10.1093/..
 
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10

A history of the MetaSUB consortium: Tracking urban microbe..:

Ryon, Krista A. ; Tierney, Braden T. ; Frolova, Alina...
iScience.  25 (2022)  11 - p. 104993 , 2022
Link: https://doi.org/10.1016/..
 
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11

Lossless Indexing with Counting de Bruijn Graphs:

, In: Lecture Notes in Computer Science; Research in Computational Molecular Biology,
Karasikov, Mikhail ; Mustafa, Harun ; Rätsch, Gunnar. - p. 374-376 , 2022
Link: https://doi.org/10.1007/..
 
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12

Biosynthetic potential of the global ocean microbiome:

Paoli, Lucas ; Ruscheweyh, Hans-Joachim ; Forneris, Clarissa C....
Nature.  607 (2022)  7917 - p. 111-118 , 2022
Link: https://doi.org/10.1038/..
 
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13

Integrated longitudinal analysis of adult grade 4 diffuse g..:

Kashani, Elham ; Schnidrig, Désirée ; Gheinani, Ali Hashemi...
Neuro-Oncology.  25 (2022)  4 - p. 662-673 , 2022
Link: https://doi.org/10.1093/..
 
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14

Lossless indexing with counting de Bruijn graphs:

Karasikov, Mikhail ; Mustafa, Harun ; Rätsch, Gunnar.
Genome Research.  32 (2022)  9 - p. 1754-1764 , 2022
Link: https://doi.org/10.1101/..
 
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15

Topology-based sparsification of graph annotations:

Danciu, Daniel ; Karasikov, Mikhail ; Mustafa, Harun..
Bioinformatics.  37 (2021)  Supplement_1 - p. i169-i176 , 2021
Link: https://doi.org/10.1093/..
 
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