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Kanada, Ryo
48
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Online (48)
Mediatypes
Articles (Online) (24)
OpenAccess-fulltext (24)
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1
Enhanced Coarse-Grained Molecular Dynamics Simulation with ..:
Kanada, Ryo
;
Tokuhisa, Atsushi
;
Nagasaka, Yusuke
...
Journal of Chemical Theory and Computation. , 2023
Link:
https://doi.org/10.1021/..
?
2
Protein–ligand binding affinity prediction of cyclin‐depend..:
Takaba, Kenichiro
;
Watanabe, Chiduru
;
Tokuhisa, Atsushi
...
Journal of Computational Chemistry. 43 (2022) 20 - p. 1362-1371 , 2022
Link:
https://doi.org/10.1002/..
?
3
A thermodynamically consistent monte carlo cross-bridge mod..:
Yoneda, Kazunori
;
Kanada, Ryo
;
Okada, Jun-ichi
...
Frontiers in Physiology. 13 (2022) - p. , 2022
Link:
https://doi.org/10.3389/..
?
4
Using incomplete Cholesky factorization to increase the tim..:
Washio, Takumi
;
Cui, Xiaoke
;
Kanada, Ryo
...
Journal of Computational and Applied Mathematics. 415 (2022) - p. 114519 , 2022
Link:
https://doi.org/10.1016/..
?
5
Enhanced Conformational Sampling with an Adaptive Coarse-Gr..:
Kanada, Ryo
;
Terayama, Kei
;
Tokuhisa, Atsushi
..
Journal of Chemical Theory and Computation. 18 (2022) 4 - p. 2062-2074 , 2022
Link:
https://doi.org/10.1021/..
?
6
Microsecond-timescale MD simulation of EGFR minor mutation ..:
Yoshizawa, Takahiro
;
Uchibori, Ken
;
Araki, Mitsugu
...
npj Precision Oncology. 5 (2021) 1 - p. , 2021
Link:
https://doi.org/10.1038/..
?
7
Semi-Implicit Time Integration with Hessian Eigenvalue Corr..:
Washio, Takumi
;
Kanada, Ryo
;
Cui, Xiaoke
...
Journal of Chemical Theory and Computation. 17 (2021) 9 - p. 5792-5804 , 2021
Link:
https://doi.org/10.1021/..
?
8
Coarse-Grained Diffraction Template Matching Model to Retri..:
Tokuhisa, Atsushi
;
Kanada, Ryo
;
Chiba, Shuntaro
...
Journal of Chemical Information and Modeling. 60 (2020) 6 - p. 2803-2818 , 2020
Link:
https://doi.org/10.1021/..
?
9
Stabilization Mechanism for a Nonfibrillar Amyloid β Oligom..:
Kawai, Ryoko
;
Chiba, Shuntaro
;
Okuwaki, Koji
...
ACS Chemical Neuroscience. 11 (2020) 3 - p. 385-394 , 2020
Link:
https://doi.org/10.1021/..
?
10
High-Precision Atomic Charge Prediction for Protein Systems..:
Kato, Koichiro
;
Masuda, Tomohide
;
Watanabe, Chiduru
...
Journal of Chemical Information and Modeling. 60 (2020) 7 - p. 3361-3368 , 2020
Link:
https://doi.org/10.1021/..
?
11
Exploring Successful Parameter Region for Coarse-Grained Si..:
Kanada, Ryo
;
Tokuhisa, Atsushi
;
Tsuda, Koji
..
Biomolecules. 10 (2020) 3 - p. 482 , 2020
Link:
https://doi.org/10.3390/..
?
12
Molecular dynamics simulation-guided drug sensitivity predi..:
Ikemura, Shinnosuke
;
Yasuda, Hiroyuki
;
Matsumoto, Shingo
...
Proceedings of the National Academy of Sciences of the United States of America. 116 (2019) 20 - p. 10025-10030 , 2019
Link:
https://www.jstor.org/st..
?
13
Prediction of ALK mutations mediating ALK-TKIs resistance a..:
Okada, Koutaroh
;
Araki, Mitsugu
;
Sakashita, Takuya
...
EBioMedicine. 41 (2019) - p. 105-119 , 2019
Link:
https://doi.org/10.1016/..
?
14
Molecular dynamics simulation-guided drug sensitivity predi..:
Ikemura, Shinnosuke
;
Yasuda, Hiroyuki
;
Matsumoto, Shingo
...
Proceedings of the National Academy of Sciences. 116 (2019) 20 - p. 10025-10030 , 2019
Link:
https://doi.org/10.1073/..
?
15
Diffusion enhancement of Brownian motors revealed by a solv..:
Kanada, Ryo
;
Shinagawa, Ryota
;
Sasaki, Kazuo
Physical Review E. 98 (2018) 6 - p. , 2018
Link:
https://doi.org/10.1103/..
1-15