Kingsford, Carl
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4

A Scalable Optimization Algorithm for Solving the Beltway a..:

, In: Lecture Notes in Computer Science; Research in Computational Molecular Biology,
Elder, C. S. ; Hoang, Minh ; Ferdosi, Mohsen. - p. 201-216 , 2024
 
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5

Graph-Based Genome Inference from Hi-C Data:

, In: Lecture Notes in Computer Science; Research in Computational Molecular Biology,
Shen, Yihang ; Yu, Lingge ; Qiu, Yutong.. - p. 115-130 , 2024
 
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6

The effect of genome graph expressiveness on the discrepanc..:

Qiu, Yutong ; Kingsford, Carl
Bioinformatics.  38 (2022)  Supplement_1 - p. i404-i412 , 2022
 
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7

DeepMinimizer: A Differentiable Framework for Optimizing Se..:

, In: Lecture Notes in Computer Science; Research in Computational Molecular Biology,
Hoang, Minh ; Zheng, Hongyu ; Kingsford, Carl - p. 52-69 , 2022
 
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8

How much data is sufficient to learn high-performing algori..:

, In: Proceedings of the 53rd Annual ACM SIGACT Symposium on Theory of Computing,
Balcan, Maria-Florina ; DeBlasio, Dan ; Dick, Travis... - p. 919-932 , 2021
 
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9

Constructing small genome graphs via string compression:

Qiu, Yutong ; Kingsford, Carl
Bioinformatics.  37 (2021)  Supplement_1 - p. i205-i213 , 2021
 
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11

Exact transcript quantification over splice graphs:

Ma, Cong ; Zheng, Hongyu ; Kingsford, Carl
Algorithms for Molecular Biology.  16 (2021)  1 - p. , 2021
 
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12

Practical selection of representative sets of RNA-seq sampl..:

Tung, Laura H ; Kingsford, Carl
Bioinformatics.  37 (2021)  Supplement_1 - p. i334-i341 , 2021
 
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14

Sequence-specific minimizers via polar sets:

Zheng, Hongyu ; Kingsford, Carl ; Marçais, Guillaume
Bioinformatics.  37 (2021)  Supplement_1 - p. i187-i195 , 2021
 
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15

Detecting transcriptomic structural variants in heterogeneo..:

Qiu, Yutong ; Ma, Cong ; Xie, Han.
Algorithms for Molecular Biology.  15 (2020)  1 - p. , 2020
 
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