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Koslicki, David
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1

sourmash v4: A multitool to quickly search, compare,and ana..:

Irber, Luiz ; Pierce-Ward, N. Tessa ; Abuelanin, Mohamed...
Journal of Open Source Software.  9 (2024)  98 - p. 6830 , 2024
Link: https://doi.org/10.21105..
 
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2

YACHT: an ANI-based statistical test to detect microbial pr..:

Koslicki, David ; White, Stephen ; Ma, Chunyu..
Bioinformatics.  40 (2024)  2 - p. , 2024
Link: https://doi.org/10.1093/..
 
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3

Finding phylogeny-aware and biologically meaningful average..:

Wei, Wei ; Millward, Andrew ; Koslicki, David
Bioinformatics.  39 (2023)  Supplement_1 - p. i57-i65 , 2023
Link: https://doi.org/10.1093/..
 
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4

An approach for collaborative development of a federated bi..:

Fecho, Karamarie ; Bizon, Chris ; Issabekova, Tursynay...
Journal of Clinical and Translational Science.  7 (2023)  1 - p. , 2023
Link: https://doi.org/10.1017/..
 
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5

ARAX: a graph-based modular reasoning tool for translationa..:

Glen, Amy K ; Ma, Chunyu ; Mendoza, Luis...
Bioinformatics.  39 (2023)  3 - p. , 2023
Link: https://doi.org/10.1093/..
 
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6

Deriving confidence intervals for mutation rates across a w..:

Rahman Hera, Mahmudur ; Pierce-Ward, N. Tessa ; Koslicki, David
Genome Research.  , 2023
Link: https://doi.org/10.1101/..
 
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7

The minimizer Jaccard estimator is biased and inconsistent:

Belbasi, Mahdi ; Blanca, Antonio ; Harris, Robert S..
Bioinformatics.  38 (2022)  Supplement_1 - p. i169-i176 , 2022
Link: https://doi.org/10.1093/..
 
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8

KGML-xDTD: a knowledge graph–based machine learning framewo..:

Ma, Chunyu ; Zhou, Zhihan ; Liu, Han.
GigaScience.  12 (2022)  - p. , 2022
Link: https://doi.org/10.1093/..
 
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9

PressPurt: network sensitivity to press perturbations under..:

Koslicki, David ; Gibbon, Dana ; Novak, Mark
F1000Research.  11 (2022)  - p. 173 , 2022
Link: https://doi.org/10.12688..
 
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10

TAMPA: interpretable analysis and visualization of metageno..:

Sarwal, Varuni ; Brito, Jaqueline ; Mangul, Serghei.
GigaScience.  12 (2022)  - p. , 2022
Link: https://doi.org/10.1093/..
 
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11

CMash: fast, multi-resolution estimation of k-mer-based Jac..:

Liu, Shaopeng ; Koslicki, David
Bioinformatics.  38 (2022)  Supplement_1 - p. i28-i35 , 2022
Link: https://doi.org/10.1093/..
 
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12

RTX-KG2: a system for building a semantically standardized ..:

Wood, E. C. ; Glen, Amy K. ; Kvarfordt, Lindsey G....
BMC Bioinformatics.  23 (2022)  1 - p. , 2022
Link: https://doi.org/10.1186/..
 
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13

TAMPA: interpretable analysis and visualization of metageno..:

, In: 2022 IEEE International Parallel and Distributed Processing Symposium Workshops (IPDPSW),
Sarwal, Varuni ; Mangul, Serghei ; Koslicki, David - p. 217-217 , 2022
Link: https://doi.org/10.1109/..
 
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14

Critical Assessment of Metagenome Interpretation: the secon..:

Meyer, Fernando ; Fritz, Adrian ; Deng, Zhi-Luo...
Nature Methods.  19 (2022)  4 - p. 429-440 , 2022
Link: https://doi.org/10.1038/..
 
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15

Technology dictates algorithms: recent developments in read..:

Alser, Mohammed ; Rotman, Jeremy ; Deshpande, Dhrithi...
Genome Biology.  22 (2021)  1 - p. , 2021
Link: https://doi.org/10.1186/..
 
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