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Lemey, Philippe
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1

The genomic evolutionary dynamics and global circulation pa..:

Langedijk, Annefleur C. ; Vrancken, Bram ; Lebbink, Robert Jan...
Nature Communications.  15 (2024)  1 - p. , 2024
Link: https://doi.org/10.1038/..
 
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2

Contemporary and historical human migration patterns shape ..:

Potter, Barney I ; Thijssen, Marijn ; Trovão, Nídia Sequeira...
Virus Evolution.  10 (2024)  1 - p. , 2024
Link: https://doi.org/10.1093/..
 
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3

Drivers and impact of the early silent invasion of SARS-CoV..:

Faucher, Benjamin ; Sabbatini, Chiara E. ; Czuppon, Peter...
Nature Communications.  15 (2024)  1 - p. , 2024
Link: https://doi.org/10.1038/..
 
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4

Random-Effects Substitution Models for Phylogenetics via Sc..:

Magee, Andrew F ; Holbrook, Andrew J ; Pekar, Jonathan E...
Systematic Biology.  , 2024
Link: https://doi.org/10.1093/..
 
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5

Underdetected dispersal and extensive local transmission dr..:

Paredes, Miguel I. ; Ahmed, Nashwa ; Figgins, Marlin...
Cell.  187 (2024)  6 - p. 1374-1386.e13 , 2024
Link: https://doi.org/10.1016/..
 
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6

The Genetic Diversity of Nipah Virus Across Spatial Scales:

Cortes-Azuero, Oscar ; Lefrancq, Noémie ; Nikolay, Birgit...
The Journal of Infectious Diseases.  , 2024
Link: https://doi.org/10.1093/..
 
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7

Many-core algorithms for high-dimensional gradients on phyl..:

Gangavarapu, Karthik ; Ji, Xiang ; Baele, Guy...
Bioinformatics.  40 (2024)  2 - p. , 2024
Link: https://doi.org/10.1093/..
 
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8

Higher HIV-1 evolutionary rate is associated with cytotoxic..:

Nazziwa, Jamirah ; Andrews, Sophie M. ; Hou, Mimi M....
Journal of Virology.  , 2024
Link: https://doi.org/10.1128/..
 
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9

Dispersion patterns of SARS-CoV-2 variants Gamma, Lambda an..:

Gräf, Tiago ; Martinez, Alexander A. ; Bello, Gonzalo...
Nature Communications.  15 (2024)  1 - p. , 2024
Link: https://doi.org/10.1038/..
 
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10

Approaches and challenges to inferring the geographical sou..:

Chen, Zhiyuan ; Lemey, Philippe ; Yu, Hongjie
The Lancet Microbe.  5 (2024)  1 - p. e81-e92 , 2024
Link: https://doi.org/10.1016/..
 
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11

Revisiting the origins of the Sobemovirus genus: A case for..:

Ghafari, Mahan ; Sõmera, Merike ; Sarmiento, Cecilia...
PLOS Pathogens.  20 (2024)  1 - p. e1011911 , 2024
Link: https://doi.org/10.1371/..
 
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12

Uncovering the endemic circulation of rabies in Cambodia:

Layan, Maylis ; Dacheux, Laurent ; Lemey, Philippe...
Molecular Ecology.  , 2023
Link: https://doi.org/10.1111/..
 
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13

Scalable Bayesian Divergence Time Estimation With Ratio Tra..:

Ji, Xiang ; Fisher, Alexander A ; Su, Shuo...
Systematic Biology.  72 (2023)  5 - p. 1136-1153 , 2023
Link: https://doi.org/10.1093/..
 
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14

Analyses of Early ZIKV Genomes Are Consistent with Viral Sp..:

de Moraes, Laise ; Portilho, Moyra M. ; Vrancken, Bram...
Viruses.  15 (2023)  6 - p. 1236 , 2023
Link: https://doi.org/10.3390/..
 
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15

Accelerating Bayesian inference of dependency between mixed..:

Zhang, Zhenyu ; Nishimura, Akihiko ; Trovão, Nídia S....
PLOS Computational Biology.  19 (2023)  8 - p. e1011419 , 2023
Link: https://doi.org/10.1371/..
 
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