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1

Recommendations for Uniform Variant Calling of SARS-CoV-2 G..:

Connor, Ryan ; Shakya, Migun ; Yarmosh, David A....
Viruses. 16 (2024) 3 - p. 430 , 2024

Link: https://doi.org/10.3390/..

2

Genomic and Phenotypic Characterization of Shiga Toxin-Prod..:

Carter, Michelle Qiu ; Quiñones, Beatriz ; He, Xiaohua...
Microorganisms. 11 (2023) 11 - p. 2803 , 2023

Link: https://doi.org/10.3390/..

3

Precise Genomic Riboregulator Control of Metabolic Flux in ..:

Pandey, Naresh ; Davison, Steffi A. ; Krishnamurthy, Malathy...
ACS Synthetic Biology. 11 (2022) 10 - p. 3216-3227 , 2022

Link: https://doi.org/10.1021/..

4

EDGE COVID-19: a web platform to generate submission-ready ..:

Lo, Chien-Chi ; Shakya, Migun ; Connor, Ryan...
Bioinformatics. 38 (2022) 10 - p. 2700-2704 , 2022

Link: https://doi.org/10.1093/..

5

Challenges in Bioinformatics Workflows for Processing Micro..:

Hu, Bin ; Canon, Shane ; Eloe-Fadrosh, Emiley A....
Frontiers in Bioinformatics. 1 (2022) - p. , 2022

Link: https://doi.org/10.3389/..

6

Benchmark datasets for SARS-CoV-2 surveillance bioinformati..:

Xiaoli, Lingzi ; Hagey, Jill V. ; Park, Daniel J....
PeerJ. 10 (2022) - p. e13821 , 2022

Link: https://doi.org/10.7717/..

7

Comparative Genomics Applied to Systematically Assess Patho..:

Carter, Michelle Qiu ; Laniohan, Nicole ; Lo, Chien-Chi.
Microorganisms. 10 (2022) 5 - p. 866 , 2022

Link: https://doi.org/10.3390/..

8

Bioinformatic and Mechanistic Analysis of the Palmerolide P..:

Avalon, Nicole E. ; Murray, Alison E. ; Daligault, Hajnalka E....
Frontiers in Chemistry. 9 (2021) - p. , 2021

Link: https://doi.org/10.3389/..

9

Discovery of an Antarctic Ascidian-Associated UncultivatedV..:

Murray, Alison E. ; Lo, Chien-Chi ; Daligault, Hajnalka E....
mSphere. 6 (2021) 6 - p. , 2021

Link: https://doi.org/10.1128/..

10

The Gut Microbiome and Alcoholic Liver Disease: Ethanol Con..:

LeBrun, Erick S. ; Nighot, Meghali ; Dharmaprakash, Viszwapriya...
Life. 11 (2020) 1 - p. 7 , 2020

Link: https://doi.org/10.3390/..

11

Standardized phylogenetic and molecular evolutionary analys..:

Shakya, Migun ; Ahmed, Sanaa A. ; Davenport, Karen W....
Scientific Reports. 10 (2020) 1 - p. , 2020

Link: https://doi.org/10.1038/..

12

A public website for the automated assessment and validatio..:

Li, Po-E ; Myers y Gutiérrez, Adán ; Davenport, Karen...
Bioinformatics. 37 (2020) 7 - p. 1024-1025 , 2020

Link: https://doi.org/10.1093/..

13

Uncovering the Core Microbiome and Distribution of Palmerol..:

Murray, Alison E. ; Avalon, Nicole E. ; Bishop, Lucas...
Marine Drugs. 18 (2020) 6 - p. 298 , 2020

Link: https://doi.org/10.3390/..

14

Advances and Challenges in Metatranscriptomic Analysis:

Shakya, Migun ; Lo, Chien-Chi ; Chain, Patrick S. G.
Frontiers in Genetics. 10 (2019) - p. , 2019

Link: https://doi.org/10.3389/..

15

Investigating intestinal permeability and gut microbiota ro..:

Alhmoud, Tarik ; Kumar, Anand ; Lo, Chien-Chi...
Human Microbiome Journal. 13 (2019) - p. 100059 , 2019

Link: https://doi.org/10.1016/..

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