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Lyskov, Sergey
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1

Combining machine learning with structure-based protein des..:

Ertelt, Moritz ; Mulligan, Vikram Khipple ; Maguire, Jack B....
PLOS Computational Biology.  20 (2024)  3 - p. e1011939 , 2024
Link: https://doi.org/10.1371/..
 
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2

Predicting ion mobility collision cross sections using proj..:

Turzo, S M Bargeen Alam ; Seffernick, Justin T ; Lyskov, Sergey.
Briefings in Bioinformatics.  24 (2023)  5 - p. , 2023
Link: https://doi.org/10.1093/..
 
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3

Stabilizing proteins, simplified: A Rosetta‐based webtool f..:

Thieker, David F. ; Maguire, Jack B. ; Kudlacek, Stephan T....
Protein Science.  31 (2022)  10 - p. , 2022
Link: https://doi.org/10.1002/..
 
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4

Ensuring scientific reproducibility in bio-macromolecular m..:

Koehler Leman, Julia ; Lyskov, Sergey ; Lewis, Steven M....
Nature Communications.  12 (2021)  1 - p. , 2021
Link: https://doi.org/10.1038/..
 
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5

Better together: Elements of successful scientific software..:

Koehler Leman, Julia ; Weitzner, Brian D. ; Renfrew, P. Douglas...
PLOS Computational Biology.  16 (2020)  5 - p. e1007507 , 2020
Link: https://doi.org/10.1371/..
 
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6

Discovery of peptide ligands through docking and virtual sc..:

Leffler, Abba E. ; Kuryatov, Alexander ; Zebroski, Henry A....
Proceedings of the National Academy of Sciences.  114 (2017)  38 - p. , 2017
Link: https://doi.org/10.1073/..
 
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7

Discovery of peptide ligands through docking and virtual sc..:

Leffler, Abba E. ; Kuryatov, Alexander ; Zebroski, Henry A....
Proceedings of the National Academy of Sciences of the United States of America.  114 (2017)  38 - p. E8100-E8109 , 2017
Link: https://www.jstor.org/st..
 
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8

Computing structure-based lipid accessibility of membrane p..:

Koehler Leman, Julia ; Lyskov, Sergey ; Bonneau, Richard
BMC Bioinformatics.  18 (2017)  1 - p. , 2017
Link: https://doi.org/10.1186/..
 
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9

Web‐accessible molecular modeling with Rosetta: The Rosetta..:

Moretti, Rocco ; Lyskov, Sergey ; Das, Rhiju..
Protein Science.  27 (2017)  1 - p. 259-268 , 2017
Link: https://doi.org/10.1002/..
 
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10

Peptiderive server: derive peptide inhibitors from protein–..:

Sedan, Yuval ; Marcu, Orly ; Lyskov, Sergey.
Nucleic Acids Research.  44 (2016)  W1 - p. W536-W541 , 2016
Link: https://doi.org/10.1093/..
 
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11

Improved prediction of antibody VL–VHorientation:

Marze, Nicholas A. ; Lyskov, Sergey ; Gray, Jeffrey J.
Protein Engineering Design and Selection.  29 (2016)  10 - p. 409-418 , 2016
Link: https://doi.org/10.1093/..
 
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12

DARC 2.0: Improved Docking and Virtual Screening at Protein..:

Gowthaman, Ragul ; Lyskov, Sergey ; Karanicolas, John.
PLOS ONE.  10 (2015)  7 - p. e0131612 , 2015
Link: https://doi.org/10.1371/..
 
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13

Serverification of Molecular Modeling Applications: The Ros..:

Lyskov, Sergey ; Chou, Fang-Chieh ; Conchúir, Shane Ó....
PLoS ONE.  8 (2013)  5 - p. e63906 , 2013
Link: https://doi.org/10.1371/..
 
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14

Alternative Computational Protocols for Supercharging Prote..:

Der, Bryan S. ; Kluwe, Christien ; Miklos, Aleksandr E....
PLoS ONE.  8 (2013)  5 - p. e64363 , 2013
Link: https://doi.org/10.1371/..
 
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15

Adding Diverse Noncanonical Backbones to Rosetta: Enabling ..:

Drew, Kevin ; Renfrew, P. Douglas ; Craven, Timothy W....
PLoS ONE.  8 (2013)  7 - p. e67051 , 2013
Link: https://doi.org/10.1371/..
 
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