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MacLean, Brendan
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1

Localization and Quantification of Post-Translational Modif..:

Bons, Joanna ; Hunter, Christie L. ; Chupalov, Rita...
Journal of the American Society for Mass Spectrometry.  34 (2023)  10 - p. 2199-2210 , 2023
Link: https://doi.org/10.1021/..
 
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2

METLIN-CCS: an ion mobility spectrometry collision cross se..:

Baker, Erin S. ; Hoang, Corey ; Uritboonthai, Winnie...
Nature Methods.  20 (2023)  12 - p. 1836-1837 , 2023
Link: https://doi.org/10.1038/..
 
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3

The ProteomeXchange consortium at 10 years: 2023 update:

Deutsch, Eric W ; Bandeira, Nuno ; Perez-Riverol, Yasset...
Nucleic Acids Research.  51 (2022)  D1 - p. D1539-D1548 , 2022
Link: https://doi.org/10.1093/..
 
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4

TurnoveR: A Skyline External Tool for Analysis of Protein T..:

Basisty, Nathan ; Shulman, Nicholas ; Wehrfritz, Cameron...
Journal of Proteome Research.  22 (2022)  2 - p. 311-322 , 2022
Link: https://doi.org/10.1021/..
 
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5

LipidCreator workbench to probe the lipidomic landscape:

Peng, Bing ; Kopczynski, Dominik ; Pratt, Brian S....
Nature Communications.  11 (2020)  1 - p. , 2020
Link: https://doi.org/10.1038/..
 
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6

The ProteomeXchange consortium in 2020: enabling 'big data'..:

Deutsch, Eric W ; Bandeira, Nuno ; Sharma, Vagisha...
Nucleic Acids Research.  , 2019
Link: https://doi.org/10.1093/..
 
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7

Panorama Public: A Public Repository for Quantitative Data ..:

Sharma, Vagisha ; Eckels, Josh ; Schilling, Birgit...
Molecular & Cellular Proteomics.  17 (2018)  6 - p. 1239-1244 , 2018
Link: https://doi.org/10.1074/..
 
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8

Skyline Performs as Well as Vendor Software in the Quantita..:

Hoofnagle, Andrew N ; MacCoss, Michael J ; MacLean, Brendan..
Clinical Chemistry.  64 (2018)  2 - p. 408-410 , 2018
Link: https://doi.org/10.1373/..
 
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9

ABRF Proteome Informatics Research Group (iPRG) 2015 Study:..:

Choi, Meena ; Eren-Dogu, Zeynep F. ; Colangelo, Christopher...
Journal of Proteome Research.  16 (2017)  2 - p. 945-957 , 2017
Link: https://doi.org/10.1021/..
 
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10

MSstatsQC: Longitudinal System Suitability Monitoring and Q..:

Dogu, Eralp ; Mohammad-Taheri, Sara ; Abbatiello, Susan E....
Molecular & Cellular Proteomics.  16 (2017)  7 - p. 1335-1347 , 2017
Link: https://doi.org/10.1074/..
 
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11

New Guidelines for Publication of Manuscripts Describing De..:

Abbatiello, Susan ; Ackermann, Bradley L. ; Borchers, Christoph...
Molecular & Cellular Proteomics.  16 (2017)  3 - p. 327-328 , 2017
Link: https://doi.org/10.1074/..
 
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12

The Skyline ecosystem: Informatics for quantitative mass sp..:

Pino, Lindsay K. ; Searle, Brian C. ; Bollinger, James G....
Mass Spectrometry Reviews.  39 (2017)  3 - p. 229-244 , 2017
Link: https://doi.org/10.1002/..
 
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13

An Automated Pipeline to Monitor System Performance in Liqu..:

Bereman, Michael S. ; Beri, Joshua ; Sharma, Vagisha...
Journal of Proteome Research.  15 (2016)  12 - p. 4763-4769 , 2016
Link: https://doi.org/10.1021/..
 
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14

A multicenter study benchmarks software tools for label-fre..:

Navarro, Pedro ; Kuharev, Jörg ; Gillet, Ludovic C...
Nature Biotechnology.  34 (2016)  11 - p. 1130-1136 , 2016
Link: https://doi.org/10.1038/..
 
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15

Peptide-Centric Proteome Analysis: An Alternative Strategy ..:

Ting, Ying S. ; Egertson, Jarrett D. ; Payne, Samuel H....
Molecular & Cellular Proteomics.  14 (2015)  9 - p. 2301-2307 , 2015
Link: https://doi.org/10.1074/..
 
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