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Matsumoto, Shigeyuki
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1

Developing a GNN-based AI model to predict mitochondrial to..:

Igarashi, Yoshinobu ; Kojima, Ryosuke ; Matsumoto, Shigeyuki...
The Journal of Toxicological Sciences.  49 (2024)  3 - p. 117-126 , 2024
Link: https://doi.org/10.2131/..
 
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2

A macrocyclic kinase inhibitor overcomes triple resistant m..:

Suzuki, Mai ; Uchibori, Ken ; Oh-hara, Tomoko...
npj Precision Oncology.  8 (2024)  1 - p. , 2024
Link: https://doi.org/10.1038/..
 
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3

Improving Compound–Protein Interaction Prediction by Self-T..:

Koyama, Takuto ; Matsumoto, Shigeyuki ; Iwata, Hiroaki..
Journal of Chemical Information and Modeling.  63 (2023)  15 - p. 4552-4559 , 2023
Link: https://doi.org/10.1021/..
 
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4

Quantitative analysis of protein dynamics using a deep lear..:

Matsumoto, Shigeyuki ; Ishida, Shoichi ; Terayama, Kei.
Biophysics and Physicobiology.  20 (2023)  2 - p. n/a , 2023
Link: https://doi.org/10.2142/..
 
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5

VGAE-MCTS: A New Molecular Generative Model Combining the V..:

Iwata, Hiroaki ; Nakai, Taichi ; Koyama, Takuto...
Journal of Chemical Information and Modeling.  63 (2023)  23 - p. 7392-7400 , 2023
Link: https://doi.org/10.1021/..
 
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6

Enhanced Conformational Sampling with an Adaptive Coarse-Gr..:

Kanada, Ryo ; Terayama, Kei ; Tokuhisa, Atsushi..
Journal of Chemical Theory and Computation.  18 (2022)  4 - p. 2062-2074 , 2022
Link: https://doi.org/10.1021/..
 
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7

Novel Calcium-Binding Ablating Mutations Induce Constitutiv..:

Tabata, Junya ; Nakaoku, Takashi ; Araki, Mitsugu...
Cancer Research.  82 (2022)  20 - p. 3751-3762 , 2022
Link: https://doi.org/10.1158/..
 
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8

Integrated approach to functional analysis of an ERBB2 vari..:

Harada, Yohei ; Sato, Akemi ; Araki, Mitsugu...
Cellular Oncology.  45 (2022)  1 - p. 121-134 , 2022
Link: https://doi.org/10.1007/..
 
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9

Exploring ligand binding pathways on proteins using hyperso..:

Araki, Mitsugu ; Matsumoto, Shigeyuki ; Bekker, Gert-Jan...
Nature Communications.  12 (2021)  1 - p. , 2021
Link: https://doi.org/10.1038/..
 
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10

Microsecond-timescale MD simulation of EGFR minor mutation ..:

Yoshizawa, Takahiro ; Uchibori, Ken ; Araki, Mitsugu...
npj Precision Oncology.  5 (2021)  1 - p. , 2021
Link: https://doi.org/10.1038/..
 
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11

Extraction of protein dynamics information from cryo-EM map..:

Matsumoto, Shigeyuki ; Ishida, Shoichi ; Araki, Mitsugu...
Nature Machine Intelligence.  3 (2021)  2 - p. 153-160 , 2021
Link: https://doi.org/10.1038/..
 
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12

Oncogenic mutations Q61L and Q61H confer active form-like s..:

Matsumoto, Shigeyuki ; Taniguchi-Tamura, Haruka ; Araki, Mitsugu...
Biochemical and Biophysical Research Communications.  565 (2021)  - p. 85-90 , 2021
Link: https://doi.org/10.1016/..
 
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13

Structure-Based de Novo Molecular Generator Combined with A..:

Ma, Biao ; Terayama, Kei ; Matsumoto, Shigeyuki...
Journal of Chemical Information and Modeling.  61 (2021)  7 - p. 3304-3313 , 2021
Link: https://doi.org/10.1021/..
 
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14

Machine learning to estimate the local quality of protein c..:

Miyaguchi, Ikuko ; Sato, Miwa ; Kashima, Akiko...
Scientific Reports.  11 (2021)  1 - p. , 2021
Link: https://doi.org/10.1038/..
 
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15

Improvement in predicting drug sensitivity changes associat..:

Ono, Fumie ; Chiba, Shuntaro ; Isaka, Yuta...
Scientific Reports.  10 (2020)  1 - p. , 2020
Link: https://doi.org/10.1038/..
 
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