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Nair, Surag
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1

Chromatin accessibility dynamics of neurogenic niche cells ..:

Yeo, Robin W. ; Zhou, Olivia Y. ; Zhong, Brian L....
Nature Aging.  3 (2023)  7 - p. 866-893 , 2023
Link: https://doi.org/10.1038/..
 
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2

Integrative single-cell analysis of cardiogenesis identifie..:

Ameen, Mohamed ; Sundaram, Laksshman ; Shen, Mengcheng...
Cell.  185 (2022)  26 - p. 4937-4953.e23 , 2022
Link: https://doi.org/10.1016/..
 
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3

The dynseq browser track shows context-specific features at..:

Nair, Surag ; Barrett, Arjun ; Li, Daofeng...
Nature Genetics.  54 (2022)  11 - p. 1581-1583 , 2022
Link: https://doi.org/10.1038/..
 
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4

Single-cell multiome of the human retina and deep learning ..:

Wang, Sean K. ; Nair, Surag ; Li, Rui...
Cell Genomics.  2 (2022)  8 - p. 100164 , 2022
Link: https://doi.org/10.1016/..
 
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5

AP-1 is a temporally regulated dual gatekeeper of reprogram..:

Markov, Glenn J. ; Mai, Thach ; Nair, Surag...
Proceedings of the National Academy of Sciences.  118 (2021)  23 - p. , 2021
Link: https://doi.org/10.1073/..
 
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6

Integrating regulatory DNA sequence and gene expression to ..:

Nair, Surag ; Kim, Daniel S ; Perricone, Jacob.
Bioinformatics.  35 (2019)  14 - p. i108-i116 , 2019
Link: https://doi.org/10.1093/..
 
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7

Deciphering regulatory DNA sequences and noncoding genetic ..:

Movva, Rajiv ; Greenside, Peyton ; Marinov, Georgi K....
PLOS ONE.  14 (2019)  6 - p. e0218073 , 2019
Link: https://doi.org/10.1371/..
 
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8

The Big Win Strategy on Multi-Value Network : An Improve..:

, In: Proceedings of the 2018 International Conference on Machine Learning and Machine Intelligence,
Chang, Nai-Yuan ; Chen, Chih-Hung ; Lin, Shun-Shii. - p. 78-81 , 2018
Link: https://dl.acm.org/doi/1..
 
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9

ChromBPNet models and data: Transcription factor stoichiome..:

Nair, Surag ; Ameen, Mohamed ; Wang, Kevin.
doi:10.5281/zenodo.8313961.  , 2023
Link: https://zenodo.org/recor..
 
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10

Transcription factor stoichiometry, motif affinity and synt..:

Nair, Surag ; Ameen, Mohamed ; Sundaram, Laksshman...
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC10592962/.  , 2023
Link: http://www.ncbi.nlm.nih...
 
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11

GENCODE: reference annotation for the human and mouse genom..:

Frankish, Adam ; Carbonell-Sala, Sílvia ; Diekhans, Mark...
https://boris.unibe.ch/175146/.  , 2023
Link: https://boris.unibe.ch/1..
 
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12

Bias factorized, base-resolution deep learning models of ch..:

Pampari, Anusri ; Shcherbina, Anna ; Nair, Surag...
https://github.com/kundajelab/chrombpnet/tree/v0.1.1.  , 2023
Link: https://zenodo.org/recor..
 
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13

Analysis Products: Transcription factor stoichiometry, moti..:

Nair, Surag ; Ameen, Mohamed ; Wang, Kevin.
doi:10.5281/zenodo.8299710.  , 2023
Link: https://zenodo.org/recor..
 
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14

Mapped data: Transcription factor stoichiometry, motif affi..:

Nair, Surag ; Ameen, Mohamed ; Wang, Kevin.
doi:10.5281/zenodo.8299710.  , 2023
Link: https://zenodo.org/recor..
 
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15

Chromatin accessibility dynamics of neurogenic niche cells ..:

Yeo, Robin W ; Zhou, Olivia Y ; Zhong, Brian L...
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC10353944/.  , 2023
Link: http://www.ncbi.nlm.nih...
 
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