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Nakato, Ryuichiro
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1

Protocol for identifying differentially expressed genes usi..:

Nagai, Luis Augusto Eijy ; Lee, Seohyun ; Nakato, Ryuichiro
STAR Protocols.  5 (2024)  1 - p. 102926 , 2024
Link: https://doi.org/10.1016/..
 
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2

Morc1 reestablishes H3K9me3 heterochromatin on piRNA-target..:

Uneme, Yuta ; Maeda, Ryu ; Nakayama, Gen...
Proceedings of the National Academy of Sciences.  121 (2024)  13 - p. , 2024
Link: https://doi.org/10.1073/..
 
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3

Loop-extruding Smc5/6 organizes transcription-induced posit..:

Jeppsson, Kristian ; Pradhan, Biswajit ; Sutani, Takashi...
Molecular Cell.  84 (2024)  5 - p. 867-882.e5 , 2024
Link: https://doi.org/10.1016/..
 
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4

Histone H3.3 chaperone HIRA renders stress‐responsive genes..:

Nagagaki, Yoshikazu ; Kozakura, Yuji ; Mahandaran, Theventhiran...
Genes to Cells.  , 2024
Link: https://doi.org/10.1111/..
 
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5

Clover: An unbiased method for prioritizing differentially ..:

Oba, Gina Miku ; Nakato, Ryuichiro
Genes to Cells.  29 (2024)  6 - p. 456-470 , 2024
Link: https://doi.org/10.1111/..
 
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6

Nutrient-driven dedifferentiation of enteroendocrine cells ..:

Nagai, Hiroki ; Nagai, Luis Augusto Eijy ; Tasaki, Sohei...
Developmental Cell.  58 (2023)  18 - p. 1764-1781.e10 , 2023
Link: https://doi.org/10.1016/..
 
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7

Phase-separated nuclear bodies of nucleoporin fusions promo..:

Oka, Masahiro ; Otani, Mayumi ; Miyamoto, Yoichi...
Cell Reports.  42 (2023)  8 - p. 112884 , 2023
Link: https://doi.org/10.1016/..
 
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8

Mesenchymal loss of p53 alters stem cell capacity and model..:

Sorimachi, Yuriko ; Kobayashi, Hiroshi ; Shiozawa, Yusuke...
Stem Cell Reports.  18 (2023)  5 - p. 1211-1226 , 2023
Link: https://doi.org/10.1016/..
 
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9

Churros: a Docker-based pipeline for large-scale epigenomic..:

Wang, Jiankang ; Nakato, Ryuichiro
DNA Research.  31 (2023)  1 - p. , 2023
Link: https://doi.org/10.1093/..
 
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10

Cell cycle-dependent gene networks for cell proliferation a..:

Homma, Miwako Kato ; Nakato, Ryuichiro ; Niida, Atsushi...
Life Science Alliance.  7 (2023)  1 - p. e202302077 , 2023
Link: https://doi.org/10.26508..
 
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11

Comprehensive multiomics analyses reveal pervasive involvem..:

Wang, Jiankang ; Nakato, Ryuichiro
iScience.  26 (2023)  6 - p. 106908 , 2023
Link: https://doi.org/10.1016/..
 
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12

Context-dependent perturbations in chromatin folding and th..:

Nakato, Ryuichiro ; Sakata, Toyonori ; Wang, Jiankang...
Nature Communications.  14 (2023)  1 - p. , 2023
Link: https://doi.org/10.1038/..
 
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13

The metabolic stress-activated checkpoint LKB1-MARK3 axis a..:

Machino, Hidenori ; Kaneko, Syuzo ; Komatsu, Masaaki...
Communications Biology.  5 (2022)  1 - p. , 2022
Link: https://doi.org/10.1038/..
 
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14

The splicing factor DHX38/PRP16 is required for ovarian cle..:

Cona, Brandon ; Hayashi, Tomoatsu ; Yamada, Ai...
FEBS Open Bio.  12 (2022)  3 - p. 582-593 , 2022
Link: https://doi.org/10.1002/..
 
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15

HSF1 phosphorylation establishes an active chromatin state ..:

Fujimoto, Mitsuaki ; Takii, Ryosuke ; Matsumoto, Masaki...
Nature Communications.  13 (2022)  1 - p. , 2022
Link: https://doi.org/10.1038/..
 
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