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Naldi, Aurelien
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1

Drug-target identification in COVID-19 disease mechanisms u..:

Niarakis, Anna ; Ostaszewski, Marek ; Mazein, Alexander...
Frontiers in Immunology.  14 (2024)  - p. , 2024
Link: https://doi.org/10.3389/..
 
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2

A large-scale Boolean model of the rheumatoid arthritis fib..:

Singh, Vidisha ; Naldi, Aurelien ; Soliman, Sylvain.
npj Systems Biology and Applications.  9 (2023)  1 - p. , 2023
Link: https://doi.org/10.1038/..
 
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3

Linear cuts in Boolean networks:

Naldi, Aurélien ; Richard, Adrien ; Tonello, Elisa
Natural Computing.  22 (2023)  3 - p. 431-451 , 2023
Link: https://doi.org/10.1007/..
 
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4

UPMaBoSS: A Novel Framework for Dynamic Cell Population Mod..:

Stoll, Gautier ; Naldi, Aurélien ; Noël, Vincent...
Frontiers in Molecular Biosciences.  9 (2022)  - p. , 2022
Link: https://doi.org/10.3389/..
 
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5

LNetReduce: Tool for Reducing Linear Dynamic Networks with ..:

, In: Computational Methods in Systems Biology; Lecture Notes in Computer Science,
Buffard, Marion ; Desoeuvres, Aurélien ; Naldi, Aurélien... - p. 238-244 , 2021
Link: https://doi.org/10.1007/..
 
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6

Benchmarking joint multi-omics dimensionality reduction app..:

Cantini, Laura ; Zakeri, Pooya ; Hernandez, Celine...
Nature Communications.  12 (2021)  1 - p. , 2021
Link: https://doi.org/10.1038/..
 
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7

Comparison of SYK Signaling Networks Reveals the Potential ..:

Buffard, Marion ; Naldi, Aurélien ; Freiss, Gilles...
Biomolecules.  11 (2021)  2 - p. 308 , 2021
Link: https://doi.org/10.3390/..
 
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8

Interplay between SMAD2 and STAT5A is a critical determinan..:

Corral-Jara, Karla Fabiola ; Chauvin, Camille ; Abou-Jaoudé, Wassim...
Molecular Biomedicine.  2 (2021)  1 - p. , 2021
Link: https://doi.org/10.1186/..
 
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9

Sex Dimorphism of Nonalcoholic Fatty Liver Disease (NAFLD) ..:

Schiffrin, Mariano ; Winkler, Carine ; Quignodon, Laure...
International Journal of Molecular Sciences.  22 (2021)  18 - p. 9969 , 2021
Link: https://doi.org/10.3390/..
 
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10

Computational Verification of Large Logical Models—Applicat..:

Hernandez, Céline ; Thomas-Chollier, Morgane ; Naldi, Aurélien.
Frontiers in Physiology.  11 (2020)  - p. , 2020
Link: https://doi.org/10.3389/..
 
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11

Dynamical Boolean Modeling of Immunogenic Cell Death:

Checcoli, Andrea ; Pol, Jonathan G. ; Naldi, Aurelien...
Frontiers in Physiology.  11 (2020)  - p. , 2020
Link: https://doi.org/10.3389/..
 
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12

SBMLLevel 3: an extensible format for the exchange and reus..:

Keating, Sarah M ; Waltemath, Dagmar ; König, Matthias...
Molecular Systems Biology.  16 (2020)  8 - p. , 2020
Link: https://doi.org/10.15252..
 
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13

Setting the basis of best practices and standards for curat..:

Niarakis, Anna ; Kuiper, Martin ; Ostaszewski, Marek...
Briefings in Bioinformatics.  22 (2020)  2 - p. 1848-1859 , 2020
Link: https://doi.org/10.1093/..
 
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14

PTPN13 induces cell junction stabilization and inhibits mam..:

Hamyeh, Mohamed ; Bernex, Florence ; Larive, Romain M....
Theranostics.  10 (2020)  3 - p. 1016-1032 , 2020
Link: https://doi.org/10.7150/..
 
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15

Automated inference of Boolean models from molecular intera..:

Aghamiri, Sara Sadat ; Singh, Vidisha ; Naldi, Aurélien...
Bioinformatics.  36 (2020)  16 - p. 4473-4482 , 2020
Link: https://doi.org/10.1093/..
 
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