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Ono, Keiichiro
165  results:
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1

A multi-scale map of protein assemblies in the DNA damage r..:

Kratz, Anton ; Kim, Minkyu ; Kelly, Marcus R....
Cell Systems.  14 (2023)  6 - p. 447-463.e8 , 2023
Link: https://doi.org/10.1016/..
 
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2

NDEx IQuery: a multi-method network gene set analysis lever..:

Pillich, Rudolf T ; Chen, Jing ; Churas, Christopher...
Bioinformatics.  39 (2023)  3 - p. , 2023
Link: https://doi.org/10.1093/..
 
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3

Deep distributed computing to reconstruct extremely large l..:

Konno, Naoki ; Kijima, Yusuke ; Watano, Keito...
Nature Biotechnology.  40 (2022)  4 - p. 566-575 , 2022
Link: https://doi.org/10.1038/..
 
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4

NDEx: Accessing Network Models and Streamlining Network Bio..:

Pillich, Rudolf T. ; Chen, Jing ; Churas, Christopher...
Current Protocols.  1 (2021)  9 - p. , 2021
Link: https://doi.org/10.1002/..
 
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5

Interpretation of cancer mutations using a multiscale map o..:

Zheng, Fan ; Kelly, Marcus R. ; Ramms, Dana J....
Science.  374 (2021)  6563 - p. , 2021
Link: https://doi.org/10.1126/..
 
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6

The Cytoscape Automation app article collection:

Demchak, Barry ; Otasek, David ; Pico, Alexander R...
F1000Research.  7 (2018)  - p. 800 , 2018
Link: https://doi.org/10.12688..
 
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7

CyREST: Turbocharging Cytoscape Access for External Tools v..:

Ono, Keiichiro ; Muetze, Tanja ; Kolishovski, Georgi..
F1000Research.  4 (2015)  - p. 478 , 2015
Link: https://doi.org/10.12688..
 
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8

cyNeo4j: connecting Neo4j and Cytoscape:

Summer, Georg ; Kelder, Thomas ; Ono, Keiichiro...
Bioinformatics.  31 (2015)  23 - p. 3868-3869 , 2015
Link: https://doi.org/10.1093/..
 
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9

Cytoscape tools for the web age: D3.js and Cytoscape.js exp..:

Ono, Keiichiro ; Demchak, Barry ; Ideker, Trey
F1000Research.  3 (2014)  - p. 143 , 2014
Link: https://doi.org/10.12688..
 
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10

KEGGscape: a Cytoscape app for pathway data integration:

Nishida, Kozo ; Ono, Keiichiro ; Kanaya, Shigehiko.
F1000Research.  3 (2014)  - p. 144 , 2014
Link: https://doi.org/10.12688..
 
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11

The Cytoscape app article collection:

Pico, Alexander R ; Bader, Gary D ; Demchak, Barry...
F1000Research.  3 (2014)  - p. 138 , 2014
Link: https://doi.org/10.12688..
 
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12

NeXO Web: the NeXO ontology database and visualization plat..:

Dutkowski, Janusz ; Ono, Keiichiro ; Kramer, Michael...
Nucleic Acids Research.  42 (2013)  D1 - p. D1269-D1274 , 2013
Link: https://doi.org/10.1093/..
 
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13

A new reference implementation of the PSICQUIC web service:

del-Toro, Noemi ; Dumousseau, Marine ; Orchard, Sandra...
Nucleic Acids Research.  41 (2013)  W1 - p. W601-W606 , 2013
Link: https://doi.org/10.1093/..
 
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14

PiNGO: a Cytoscape plugin to find candidate genes in biolog..:

Smoot, Michael ; Ono, Keiichiro ; Ideker, Trey.
Bioinformatics.  27 (2011)  7 - p. 1030-1031 , 2011
Link: https://doi.org/10.1093/..
 
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15

Cytoscape 2.8: new features for data integration and networ..:

Smoot, Michael E. ; Ono, Keiichiro ; Ruscheinski, Johannes..
Bioinformatics.  27 (2010)  3 - p. 431-432 , 2010
Link: https://doi.org/10.1093/..
 
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