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Pandini, Alessandro
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1

PyCoM: a python library for large-scale analysis of residue..:

Bibik, Philipp ; Alibai, Sabriyeh ; Pandini, Alessandro..
Bioinformatics.  40 (2024)  4 - p. , 2024
Link: https://doi.org/10.1093/..
 
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2

N4BP1 functions as a dimerization-dependent linear ubiquiti..:

Kliza, Katarzyna W. ; Song, Wei ; Pinzuti, Irene...
Cell Death Discovery.  10 (2024)  1 - p. , 2024
Link: https://doi.org/10.1038/..
 
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3

MDSubSampler: A Python library for a posteriori sampling of..:

Oues, Namir ; Dantu, Sarath C. ; Patel, Riktaben J..
Biophysical Journal.  123 (2024)  3 - p. 422a-423a , 2024
Link: https://doi.org/10.1016/..
 
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4

MDSubSampler: a posteriori sampling of important protein co..:

Oues, Namir ; Dantu, Sarath Chandra ; Patel, Riktaben Jigarkumar..
Bioinformatics.  39 (2023)  7 - p. , 2023
Link: https://doi.org/10.1093/..
 
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5

Editorial: Computational drug discovery for targeting of pr..:

Morra, Giulia ; Meli, Massimiliano ; Moroni, Elisabetta.
Frontiers in Chemistry.  11 (2023)  - p. , 2023
Link: https://doi.org/10.3389/..
 
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6

PathDetect-SOM: A Neural Network Approach for the Identific..:

Motta, Stefano ; Callea, Lara ; Bonati, Laura.
Journal of Chemical Theory and Computation.  18 (2022)  3 - p. 1957-1968 , 2022
Link: https://doi.org/10.1021/..
 
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7

Recognizing the Binding Pattern and Dissociation Pathways o..:

Li, Tongtong ; Motta, Stefano ; Stevens, Amy O....
JACS Au.  2 (2022)  8 - p. 1935-1945 , 2022
Link: https://doi.org/10.1021/..
 
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8

Dynamic Profiling of β-Coronavirus 3CL Mpro Protease Ligand..:

Cho, Eunice ; Rosa, Margarida ; Anjum, Ruhi...
Journal of Chemical Information and Modeling.  61 (2021)  6 - p. 3058-3073 , 2021
Link: https://doi.org/10.1021/..
 
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9

Editorial: Computational Drug Discovery for Targeting of Pr..:

Meli, Massimiliano ; Pandini, Alessandro ; Morra, Giulia
Frontiers in Chemistry.  9 (2021)  - p. , 2021
Link: https://doi.org/10.3389/..
 
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10

Machine Learning Prediction of Allosteric Drug Activity fro..:

Marchetti, Filippo ; Moroni, Elisabetta ; Pandini, Alessandro.
The Journal of Physical Chemistry Letters.  12 (2021)  15 - p. 3724-3732 , 2021
Link: https://doi.org/10.1021/..
 
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11

Reconstruction of ARNT PAS-B Unfolding Pathways by Steered ..:

Motta, Stefano ; Pandini, Alessandro ; Fornili, Arianna.
Journal of Chemical Theory and Computation.  17 (2021)  4 - p. 2080-2089 , 2021
Link: https://doi.org/10.1021/..
 
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12

Structure-based enzyme engineering improves donor-substrate..:

Akere, Aishat ; Chen, Serena H. ; Liu, Xiaohan...
Biochemical Journal.  477 (2020)  15 - p. 2791-2805 , 2020
Link: https://doi.org/10.1042/..
 
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13

Structure, Dynamics and Cellular Insight Into Novel Substra..:

Portlock, Theo J. ; Tyson, Jessica Y. ; Dantu, Sarath C....
Frontiers in Molecular Biosciences.  7 (2020)  - p. , 2020
Link: https://doi.org/10.3389/..
 
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14

Conformational coupling by trans-phosphorylation in calcium..:

Pandini, Alessandro ; Schulman, Howard ; Khan, Shahid.
PLOS Computational Biology.  15 (2019)  5 - p. e1006796 , 2019
Link: https://doi.org/10.1371/..
 
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15

Ligand-induced perturbation of the HIF-2α:ARNT dimer dynami..:

Motta, Stefano ; Minici, Claudia ; Corrada, Dario...
PLOS Computational Biology.  14 (2018)  2 - p. e1006021 , 2018
Link: https://doi.org/10.1371/..
 
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