E-LIB Suche - Ergebnisse für: Patro, Rob

1

Fast, parallel, and cache-friendly suffix array constructio:

Khan, Jamshed ; Rubel, Tobias ; Molloy, Erin..
Algorithms for Molecular Biology. 19 (2024) 1 - p. , 2024

Link: https://doi.org/10.1186/..

2

Forseti: a mechanistic and predictive model of the splicing..:

He, Dongze ; Gao, Yuan ; Chan, Spencer Skylar..
Bioinformatics. 40 (2024) Supplement_1 - p. i297-i306 , 2024

Link: https://doi.org/10.1093/..

3

Designing efficient randstrobes for sequence similarity ana..:

Karami, Moein ; Soltani Mohammadi, Aryan ; Martin, Marcel...
Bioinformatics. 40 (2024) 4 - p. , 2024

Link: https://doi.org/10.1093/..

4

DifferentialRegulation: a Bayesian hierarchical approach to..:

Tiberi, Simone ; Meili, Joël ; Cai, Peiying...
Biostatistics. , 2024

Link: https://doi.org/10.1093/..

5

Meta-colored Compacted de Bruijn Graphs:

, In: Lecture Notes in Computer Science; Research in Computational Molecular Biology,

Pibiri, Giulio Ermanno ; Fan, Jason ; Patro, Rob - p. 131-146 , 2024

Link: https://doi.org/10.1007/..

6

Fulgor: a fast and compact k-mer index for large-scale matc..:

Fan, Jason ; Khan, Jamshed ; Singh, Noor Pratap..
Algorithms for Molecular Biology. 19 (2024) 1 - p. , 2024

Link: https://doi.org/10.1186/..

7

SEESAW: detecting isoform-level allelic imbalance accountin..:

Wu, Euphy Y. ; Singh, Noor P. ; Choi, Kwangbom...
Genome Biology. 24 (2023) 1 - p. , 2023

Link: https://doi.org/10.1186/..

8

Best practices for single-cell analysis across modalities:

Heumos, Lukas ; Schaar, Anna C. ; Lance, Christopher...
Nature Reviews Genetics. 24 (2023) 8 - p. 550-572 , 2023

Link: https://doi.org/10.1038/..

9

TreeTerminus —creating transcript trees using inferential r..:

Singh, Noor Pratap ; Love, Michael I. ; Patro, Rob
iScience. 26 (2023) 6 - p. 106961 , 2023

Link: https://doi.org/10.1016/..

10

Spectrum Preserving Tilings Enable Sparse and Modular Refer..:

, In: Lecture Notes in Computer Science; Research in Computational Molecular Biology,

Fan, Jason ; Khan, Jamshed ; Pibiri, Giulio Ermanno. - p. 21-40 , 2023

Link: https://doi.org/10.1007/..

11

simpleaf: a simple, flexible, and scalable framework for si..:

He, Dongze ; Patro, Rob ; Ponty, Yann
Bioinformatics. 39 (2023) 10 - p. , 2023

Link: https://doi.org/10.1093/..

12

Alevin-fry unlocks rapid, accurate and memory-frugal quanti..:

He, Dongze ; Zakeri, Mohsen ; Sarkar, Hirak...
Nature Methods. 19 (2022) 3 - p. 316-322 , 2022

Link: https://doi.org/10.1038/..

13

Airpart: interpretable statistical models for analyzing all..:

Mu, Wancen ; Sarkar, Hirak ; Srivastava, Avi...
Bioinformatics. 38 (2022) 10 - p. 2773-2780 , 2022

Link: https://doi.org/10.1093/..

14

Perplexity: evaluating transcript abundance estimation in t..:

Fan, Jason ; Chan, Skylar ; Patro, Rob
Algorithms for Molecular Biology. 17 (2022) 1 - p. , 2022

Link: https://doi.org/10.1186/..

15

Scalable, ultra-fast, and low-memory construction of compac..:

Khan, Jamshed ; Kokot, Marek ; Deorowicz, Sebastian.
Genome Biology. 23 (2022) 1 - p. , 2022

Link: https://doi.org/10.1186/..