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Phaneuf, Patrick V
82
results:
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Online (82)
Mediatypes
Articles (Online) (29)
OpenAccess-fulltext (53)
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english (47)
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1
BGCFlow: systematic pangenome workflow for the analysis of ..:
Nuhamunada, Matin
;
Mohite, Omkar S
;
Phaneuf, Patrick V
..
Nucleic Acids Research. 52 (2024) 10 - p. 5478-5495 , 2024
Link:
https://doi.org/10.1093/..
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2
Escherichia coli non-coding regulatory regions are highly c..:
Lamoureux, Cameron R
;
Phaneuf, Patrick V
;
Palsson, Bernhard O
.
NAR Genomics and Bioinformatics. 6 (2024) 2 - p. , 2024
Link:
https://doi.org/10.1093/..
?
3
Laboratory evolution, transcriptomics, and modeling reveal ..:
Rychel, Kevin
;
Tan, Justin
;
Patel, Arjun
...
Cell Reports. 42 (2023) 9 - p. 113105 , 2023
Link:
https://doi.org/10.1016/..
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4
Laboratory evolution reveals general and specific tolerance..:
Lennen, Rebecca M.
;
Lim, Hyun Gyu
;
Jensen, Kristian
...
Metabolic Engineering. 76 (2023) - p. 179-192 , 2023
Link:
https://doi.org/10.1016/..
?
5
Laboratory evolution of synthetic electron transport system..:
Anand, Amitesh
;
Patel, Arjun
;
Chen, Ke
...
Nature Communications. 13 (2022) 1 - p. , 2022
Link:
https://doi.org/10.1038/..
?
6
Escherichia coli Data-Driven Strain Design Using Aggregated..:
Phaneuf, Patrick V.
;
Zielinski, Daniel C.
;
Yurkovich, James T.
...
ACS Synthetic Biology. 10 (2021) 12 - p. 3379-3395 , 2021
Link:
https://doi.org/10.1021/..
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7
iModulonDB: a knowledgebase of microbial transcriptional re..:
Rychel, Kevin
;
Decker, Katherine
;
Sastry, Anand V
...
Nucleic Acids Research. 49 (2020) D1 - p. D112-D120 , 2020
Link:
https://doi.org/10.1093/..
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8
Kinetic profiling of metabolic specialists demonstrates sta..:
Heckmann, David
;
Campeau, Anaamika
;
Lloyd, Colton J.
...
Proceedings of the National Academy of Sciences. 117 (2020) 37 - p. 23182-23190 , 2020
Link:
https://doi.org/10.1073/..
?
9
Adaptive laboratory evolution of Escherichia coli under aci..:
Du, Bin
;
Olson, Connor A.
;
Sastry, Anand V.
...
Microbiology. 166 (2020) 2 - p. 141-148 , 2020
Link:
https://doi.org/10.1099/..
?
10
Kinetic profiling of metabolic specialists demonstrates sta..:
Heckmann, David
;
Campeau, Anaamika
;
Lloyd, Colton J.
...
Proceedings of the National Academy of Sciences of the United States of America. 117 (2020) 37 - p. 23182-23190 , 2020
Link:
https://www.jstor.org/st..
?
11
The Bitome: digitized genomic features reveal fundamental g..:
Lamoureux, Cameron R
;
Choudhary, Kumari Sonal
;
King, Zachary A
...
Nucleic Acids Research. 48 (2020) 18 - p. 10157-10163 , 2020
Link:
https://doi.org/10.1093/..
?
12
Causal mutations from adaptive laboratory evolution are out..:
Phaneuf, Patrick V.
;
Yurkovich, James T.
;
Heckmann, David
...
BMC Genomics. 21 (2020) 1 - p. , 2020
Link:
https://doi.org/10.1186/..
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13
Adaptive evolution reveals a tradeoff between growth rate a..:
Anand, Amitesh
;
Chen, Ke
;
Yang, Laurence
...
Proceedings of the National Academy of Sciences of the United States of America. 116 (2019) 50 - p. 25287-25292 , 2019
Link:
https://www.jstor.org/st..
?
14
Adaptive evolution reveals a tradeoff between growth rate a..:
Anand, Amitesh
;
Chen, Ke
;
Yang, Laurence
...
Proceedings of the National Academy of Sciences. 116 (2019) 50 - p. 25287-25292 , 2019
Link:
https://doi.org/10.1073/..
?
15
The genetic basis for adaptation of model-designed syntroph..:
Lloyd, Colton J.
;
King, Zachary A.
;
Sandberg, Troy E.
...
PLOS Computational Biology. 15 (2019) 3 - p. e1006213 , 2019
Link:
https://doi.org/10.1371/..
1-15