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Robin Ganesan (10676064)
17  results:
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1

Readthrough efficiency increased with 3'-UTR lengths in eRF..:

Kotchaphorn Mangkalaphiban (9767180) ; Feng He (47348) ; Robin Ganesan (10676064)...
https://figshare.com/articles/figure/Readthrough_efficiency_increased_with_3_-UTR_lengths_in_eRF1_mutants_but_not_in_wild-type_or_ribosome_recycling_factor_mutant_cells_/14455614.  , 2021
Link: https://doi.org/10.1371/..
 
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2

Reproducibility between replicates of sup45 temperature-shi..:

Kotchaphorn Mangkalaphiban (9767180) ; Feng He (47348) ; Robin Ganesan (10676064)...
https://figshare.com/articles/figure/Reproducibility_between_replicates_of_i_sup45_i_temperature-shift_ribosome_profiling_and_RNA-Seq_datasets_/14455572.  , 2021
Link: https://doi.org/10.1371/..
 
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3

Ribosome occupancy at and beyond the stop codon increases i..:

Kotchaphorn Mangkalaphiban (9767180) ; Feng He (47348) ; Robin Ganesan (10676064)...
https://figshare.com/articles/figure/Ribosome_occupancy_at_and_beyond_the_stop_codon_increases_in_yeast_cells_defective_in_translation_termination_or_ribosome_recycling_/14455593.  , 2021
Link: https://doi.org/10.1371/..
 
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4

Definition of X and Y Variables:

Kotchaphorn Mangkalaphiban (9767180) ; Feng He (47348) ; Robin Ganesan (10676064)...
https://figshare.com/articles/figure/Definition_of_X_and_Y_Variables_/14455599.  , 2021
Link: https://doi.org/10.1371/..
 
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5

Correlation matrix of relationships between readthrough eff..:

Kotchaphorn Mangkalaphiban (9767180) ; Feng He (47348) ; Robin Ganesan (10676064)...
https://figshare.com/articles/figure/Correlation_matrix_of_relationships_between_readthrough_efficiency_gene_expression_translation_efficiency_codon_optimality_and_transcript_length_/14455578.  , 2021
Link: https://doi.org/10.1371/..
 
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6

Specific codons in the P site were associated with higher o..:

Kotchaphorn Mangkalaphiban (9767180) ; Feng He (47348) ; Robin Ganesan (10676064)...
https://figshare.com/articles/figure/Specific_codons_in_the_P_site_were_associated_with_higher_or_lower_readthrough_efficiencies_/14455611.  , 2021
Link: https://doi.org/10.1371/..
 
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7

Readthrough events were characterized by maintenance of rea..:

Kotchaphorn Mangkalaphiban (9767180) ; Feng He (47348) ; Robin Ganesan (10676064)...
https://figshare.com/articles/figure/Readthrough_events_were_characterized_by_maintenance_of_reading_frame_when_ribosomes_bypass_the_stop_codon_/14455596.  , 2021
Link: https://doi.org/10.1371/..
 
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8

Offset from 5' and 3' ends of footprint to the first nucleo..:

Kotchaphorn Mangkalaphiban (9767180) ; Feng He (47348) ; Robin Ganesan (10676064)...
https://figshare.com/articles/journal_contribution/Offset_from_5_and_3_ends_of_footprint_to_the_first_nucleotide_in_the_P-site_for_each_footprint_length_in_each_sample_/14455590.  , 2021
Link: https://doi.org/10.1371/..
 
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9

Readthrough efficiency of PTC-containing alleles and riboso..:

Kotchaphorn Mangkalaphiban (9767180) ; Feng He (47348) ; Robin Ganesan (10676064)...
https://figshare.com/articles/figure/Readthrough_efficiency_of_PTC-containing_alleles_and_ribosome_occupancy_in_the_transcripts_of_two_intron-containing_genes_/14455575.  , 2021
Link: https://doi.org/10.1371/..
 
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10

Comparison of nt -3 to +9 effects (based on Figs 5 and 6) t..:

Kotchaphorn Mangkalaphiban (9767180) ; Feng He (47348) ; Robin Ganesan (10676064)...
https://figshare.com/articles/dataset/Comparison_of_nt_-3_to_9_effects_based_on_Figs_5_and_6_to_previous_data_5_/14455620.  , 2021
Link: https://doi.org/10.1371/..
 
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11

Number of genes involved in statistical analyses:

Kotchaphorn Mangkalaphiban (9767180) ; Feng He (47348) ; Robin Ganesan (10676064)...
https://figshare.com/articles/journal_contribution/Number_of_genes_involved_in_statistical_analyses_/14455584.  , 2021
Link: https://doi.org/10.1371/..
 
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12

Known individual effects of stop codon and surrounding nucl..:

Kotchaphorn Mangkalaphiban (9767180) ; Feng He (47348) ; Robin Ganesan (10676064)...
https://figshare.com/articles/figure/Known_individual_effects_of_stop_codon_and_surrounding_nucleotide_identities_on_readthrough_efficiency_occur_at_a_genome-wide_level_/14455605.  , 2021
Link: https://doi.org/10.1371/..
 
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13

Random forest identified stop codon identity, P-site amino ..:

Kotchaphorn Mangkalaphiban (9767180) ; Feng He (47348) ; Robin Ganesan (10676064)...
https://figshare.com/articles/figure/Random_forest_identified_stop_codon_identity_P-site_amino_acid_identity_and_3_-UTR_length_as_factors_critical_in_readthrough_efficiency_prediction_/14455602.  , 2021
Link: https://doi.org/10.1371/..
 
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14

Ribosome profiling reads processing and alignment statistic:

Kotchaphorn Mangkalaphiban (9767180) ; Feng He (47348) ; Robin Ganesan (10676064)...
https://figshare.com/articles/journal_contribution/Ribosome_profiling_reads_processing_and_alignment_statistics_/14455587.  , 2021
Link: https://doi.org/10.1371/..
 
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15

Readthrough-permissive combinations of stop codon and nt +4..:

Kotchaphorn Mangkalaphiban (9767180) ; Feng He (47348) ; Robin Ganesan (10676064)...
https://figshare.com/articles/figure/Readthrough-permissive_combinations_of_stop_codon_and_nt_4_identities_have_additive_effects_on_readthrough_efficiency_and_are_avoided_in_the_genome_/14455608.  , 2021
Link: https://doi.org/10.1371/..
 
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